Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   B4U62_RS16335 Genome accession   NZ_CP020102
Coordinates   3113203..3113898 (-) Length   231 a.a.
NCBI ID   WP_004399109.1    Uniprot ID   O34951
Organism   Bacillus subtilis strain NCIB 3610     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 3108203..3118898
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  B4U62_RS16315 (B4U62_16315) yttA 3108630..3109376 (+) 747 WP_003229141.1 LMBR1 domain-containing protein -
  B4U62_RS16320 (B4U62_16320) bceB 3109413..3111353 (-) 1941 WP_003229139.1 bacitracin ABC transporter permease BceB -
  B4U62_RS16325 (B4U62_16325) bceA 3111343..3112104 (-) 762 WP_003229137.1 bacitracin ABC transporter ATP-binding protein BceA -
  B4U62_RS16330 (B4U62_16330) bceS 3112206..3113210 (-) 1005 WP_004398652.1 two-component sensor histidine kinase BceS -
  B4U62_RS16335 (B4U62_16335) braR 3113203..3113898 (-) 696 WP_004399109.1 two-component response regulator BceR Regulator
  B4U62_RS16340 (B4U62_16340) ytrF 3113995..3115305 (-) 1311 WP_004398682.1 ABC transporter permease YtrF -
  B4U62_RS16345 (B4U62_16345) ytrE 3115295..3115990 (-) 696 WP_003229129.1 ABC transporter ATP-binding protein YtrE -
  B4U62_RS16350 (B4U62_16350) ytrD 3116005..3116982 (-) 978 WP_004398887.1 ABC transporter permease YtrD -
  B4U62_RS16355 (B4U62_16355) ytrC 3117012..3117998 (-) 987 WP_003246175.1 ABC transporter permease YtrC -
  B4U62_RS16360 (B4U62_16360) ytrB 3117992..3118870 (-) 879 WP_004398506.1 ABC transporter ATP-binding protein YtrB -

Sequence

Protein


Download         Length: 231 a.a.        Molecular weight: 26866.74 Da        Isoelectric Point: 5.3731

>NTDB_id=184899 B4U62_RS16335 WP_004399109.1 3113203..3113898(-) (braR) [Bacillus subtilis strain NCIB 3610]
MFKLLLIEDDESLFHEIKDRLTGWSYDVYGIQDFSQVLQEFAAVNPDCVIIDVQLPKFDGFHWCRLIRSRSNVPILFLSS
RDHPADMVMSMQLGADDFIQKPFHFDVLIAKIQAMFRRVHHYNTEPSTIKTWCGAAVDAEQNLVSNDKGSVELTKNEMFI
LKQLIEQKNKIVSREELIRSLWNDERFVSDNTLTVNVNRLRKKLDALQLGAYIETKVGQGYIAKEEDKFYD

Nucleotide


Download         Length: 696 bp        

>NTDB_id=184899 B4U62_RS16335 WP_004399109.1 3113203..3113898(-) (braR) [Bacillus subtilis strain NCIB 3610]
TTGTTTAAACTTTTGCTGATTGAAGATGATGAATCGCTGTTTCATGAAATCAAGGATCGTTTAACGGGATGGTCCTATGA
TGTATACGGCATTCAGGATTTCAGTCAGGTGCTGCAGGAATTTGCGGCGGTTAATCCTGATTGTGTCATTATTGATGTGC
AGCTGCCTAAATTTGACGGCTTTCATTGGTGCCGTCTGATCCGCTCCCGGTCAAATGTTCCGATTCTCTTTTTATCCTCC
CGGGATCATCCTGCTGATATGGTGATGTCCATGCAGCTCGGGGCAGATGACTTTATTCAAAAGCCATTTCATTTTGATGT
GCTGATCGCGAAAATCCAAGCGATGTTCCGGCGTGTGCACCATTATAATACGGAGCCGAGTACGATTAAAACGTGGTGCG
GCGCTGCTGTAGACGCGGAGCAGAACCTCGTCAGCAATGACAAAGGATCTGTTGAACTGACCAAAAATGAAATGTTCATT
CTAAAACAATTAATAGAGCAAAAAAACAAGATCGTCAGCCGGGAAGAGCTGATCAGAAGCTTGTGGAACGATGAGCGTTT
TGTTAGTGATAATACGCTGACCGTCAATGTCAATCGCCTGCGAAAAAAACTGGACGCCCTGCAGCTTGGTGCATATATCG
AGACAAAGGTGGGCCAGGGCTACATCGCGAAGGAAGAGGACAAGTTCTATGATTAA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(5-113)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(150-222)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB O34951

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

39.545

95.238

0.377

Multiple sequence alignment