Detailed information NTG0184899

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: A8O17_RS13065
• Genome accession: NZ_CP015975
• Coordinates: 2467598..2469994 (-)
• Length: 798 a.a.
• NCBI ID: WP_004398511.1
• Uniprot ID: A0AAE2VFP8
• Organism: Bacillus subtilis subsp. subtilis strain delta6
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2462598..2474994

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
A8O17_RS13030 (A8O17_13030)	glnQ	2463670..2464398 (+)	729	WP_003246180.1	amino acid ABC transporter ATP-binding protein	-
A8O17_RS13035 (A8O17_13035)	glnH	2464420..2465241 (+)	822	WP_003245954.1	glutamine ABC transporter substrate-binding protein GlnH	-
A8O17_RS13040 (A8O17_13040)	glnM	2465302..2465952 (+)	651	WP_004398664.1	amino acid ABC transporter permease	-
A8O17_RS13045 (A8O17_13045)	glnP	2465969..2466625 (+)	657	WP_003229784.1	amino acid ABC transporter permease	-
A8O17_RS13050 (A8O17_13050)	yrzQ	2466660..2466791 (-)	132	WP_003229780.1	YrzQ family protein	-
A8O17_RS13055 (A8O17_13055)	-	2466813..2467004 (-)	192	WP_003225893.1	hypothetical protein	-
A8O17_RS13060 (A8O17_13060)	yrrD	2467016..2467540 (-)	525	WP_010886583.1	PRC-barrel domain-containing protein	-
A8O17_RS13065 (A8O17_13065)	recD2	2467598..2469994 (-)	2397	WP_004398511.1	ATP-dependent RecD-like DNA helicase	Machinery gene
A8O17_RS13070 (A8O17_13070)	yrrB	2470019..2470639 (-)	621	WP_010886584.1	tetratricopeptide repeat protein	-
A8O17_RS13075 (A8O17_13075)	mnmA	2470725..2471840 (-)	1116	WP_004398509.1	tRNA 2-thiouridine(34) synthase MnmA	-
A8O17_RS13080 (A8O17_13080)	iscSA	2471871..2473010 (-)	1140	WP_003246057.1	cysteine desulfurase family protein	-
A8O17_RS13085 (A8O17_13085)	cymR	2473029..2473445 (-)	417	WP_003225879.1	cysteine metabolism transcriptional regulator CymR	-
A8O17_RS13090 (A8O17_13090)	rarA	2473648..2474913 (+)	1266	WP_004398500.1	replication-associated recombination protein A	-

Sequence

Protein

• Length: 798 a.a.
• Molecular weight: 89183.74 Da
• Isoelectric Point: 5.0291

>NTDB_id=184899 A8O17_RS13065 WP_004398511.1 2467598..2469994(-) (recD2) [Bacillus subtilis subsp. subtilis strain delta6]
MQQHPDQLKLEEEPYLKGTVNTVIYHNDTNLYTVLKVKVTETSEAIEDKAVSVTGYFPALQEEETYTFYGKIVTHPKFGL
QFQAEHFKKEIPTTKEGIIQYLSSDLFEGIGKKTAEEIVKKLGDSAINKILADASVLYDVPRLSKKKADTLAGALQRHQG
LEQIMISLNQFGFGPQLSMKIYQAYESETLEKIQENPYQLVKDVEGIGFGKADELGSRMGLSGNHPERVKAAILYTLETT
CLSEGHTYIETEQLIIDTQSLLNQSAREGQRITEMDAANAIIALGENKDIVIEDGRCYFPSLFYAEQNVAKRVKHIASQT
EYENQFPESEFLLALGELEERMDVQYAPSQKEAIQKALSSPMLLLTGGPGTGKTTVIRGIVELYGELHGVSLDPSAYKKD
EAFPIVLAAPTGRAAKRMSESTGLPAVTIHRLLGWNGAEGFTHTEDQPIEGKLLIIDEASMLDIWLANHLFKAIPDHIQI
IIVGDEDQLPSVGPGQVLRDLLASQVIPTVRLTDIYRQAEGSSIVELAHQMKNGLLPNNLTAPTKDRSFIRCGGSQIKEV
VEKVVANALKKGYTAKDIQVLAPMYRGKAGINELNVMLQDILNPPKEKRRELKFGDVVYRTGDKILQLVNQPENNVFNGD
IGEITSIFYAKENTEKEDMAVVSFDGNEMTFTKKDFNQFTHAYCCSIHKSQGSEFPIVVLPVVKGYYRMLRRNLLYTAIT
RAKKFLILCGEEEALEWGVKNNDATVRQTSLKNRLSVQVEEMDAELEALQKELPFSVHDANIGMEGITPFDFMKEEQQ

Nucleotide

• Length: 2397 bp

>NTDB_id=184899 A8O17_RS13065 WP_004398511.1 2467598..2469994(-) (recD2) [Bacillus subtilis subsp. subtilis strain delta6]
GTGCAGCAGCATCCGGATCAGCTTAAACTGGAGGAAGAGCCCTATTTAAAAGGGACAGTCAACACAGTCATCTATCATAA
TGACACCAATTTATATACGGTTCTGAAAGTGAAAGTCACAGAGACCTCCGAAGCCATTGAAGATAAAGCCGTATCCGTGA
CGGGCTACTTCCCTGCGCTTCAAGAAGAAGAGACCTACACGTTTTACGGAAAGATCGTAACCCATCCAAAATTCGGGCTC
CAATTTCAGGCGGAGCATTTCAAAAAGGAGATTCCAACGACTAAGGAAGGCATCATTCAATATTTATCGAGTGATTTATT
CGAGGGGATCGGCAAAAAAACAGCTGAAGAAATTGTGAAAAAGCTGGGCGACAGCGCCATTAATAAAATATTGGCTGATG
CTTCAGTGCTTTATGATGTTCCCAGACTCTCAAAAAAGAAAGCAGACACGCTGGCTGGCGCATTGCAGCGGCATCAGGGA
CTGGAGCAAATCATGATTTCCTTGAATCAGTTTGGCTTTGGCCCGCAGCTGTCTATGAAAATCTATCAAGCCTATGAATC
CGAGACGCTTGAAAAGATTCAGGAAAATCCTTATCAGCTTGTGAAGGATGTAGAAGGCATCGGGTTTGGAAAAGCGGATG
AGCTGGGCAGCAGAATGGGTCTTTCGGGTAATCATCCTGAGCGGGTAAAAGCTGCTATTTTGTACACGCTTGAAACGACT
TGTCTGTCAGAGGGGCACACGTACATAGAAACGGAACAGCTGATCATCGACACTCAATCACTGTTAAACCAGTCAGCAAG
GGAAGGGCAGCGCATTACAGAAATGGATGCCGCTAACGCAATTATTGCCCTTGGAGAAAATAAAGACATTGTCATAGAAG
ATGGCCGCTGTTATTTTCCTTCGCTGTTTTACGCAGAACAAAACGTTGCAAAGCGTGTGAAACATATCGCTAGCCAAACC
GAATATGAGAACCAGTTTCCCGAATCAGAGTTTTTGCTCGCGTTGGGAGAACTGGAAGAACGGATGGACGTTCAGTATGC
CCCCAGCCAGAAGGAAGCGATTCAAAAAGCCCTTTCCTCGCCGATGCTTCTTTTAACAGGCGGCCCGGGAACAGGAAAAA
CGACGGTAATCAGAGGGATTGTCGAGCTCTACGGAGAGCTTCACGGTGTGTCACTAGACCCGTCAGCTTATAAAAAGGAT
GAAGCTTTTCCGATTGTTTTGGCCGCTCCGACAGGGAGAGCAGCAAAACGGATGAGTGAATCAACGGGACTCCCTGCAGT
TACGATACACAGGCTGCTTGGCTGGAACGGCGCTGAAGGCTTTACTCATACAGAGGATCAGCCGATCGAAGGGAAGCTGT
TAATTATCGATGAAGCCAGTATGCTTGATATATGGCTGGCGAATCATTTGTTCAAGGCGATCCCTGATCATATACAAATC
ATCATTGTCGGAGACGAAGACCAGCTGCCTTCCGTCGGTCCGGGACAAGTGCTCAGAGACCTGCTGGCATCCCAGGTGAT
TCCGACTGTGAGACTGACAGACATCTATCGCCAGGCAGAAGGGTCATCAATCGTCGAGCTTGCCCACCAGATGAAAAATG
GATTGCTGCCGAACAATTTGACTGCCCCGACAAAGGACCGTTCCTTTATTCGCTGCGGCGGGTCGCAAATCAAAGAAGTA
GTTGAGAAGGTTGTCGCCAATGCATTGAAAAAAGGCTATACAGCAAAGGACATTCAGGTCCTCGCTCCGATGTACAGAGG
AAAAGCCGGCATTAATGAATTGAATGTGATGCTGCAGGACATTTTAAATCCTCCTAAAGAAAAACGGAGAGAATTGAAGT
TCGGGGATGTTGTCTACAGAACCGGAGATAAAATTTTGCAGCTTGTCAATCAGCCGGAAAACAATGTGTTCAACGGAGAT
ATTGGCGAAATCACGTCGATATTTTATGCAAAGGAAAATACAGAAAAAGAAGACATGGCCGTCGTTTCTTTTGACGGCAA
TGAAATGACATTTACGAAAAAAGATTTTAATCAATTTACCCATGCGTATTGCTGTTCTATTCATAAATCGCAGGGAAGTG
AATTTCCGATTGTGGTTTTGCCTGTTGTGAAAGGCTATTATAGAATGCTCAGAAGAAACCTTCTTTATACCGCGATTACA
AGAGCGAAGAAATTTCTCATTTTATGCGGGGAAGAGGAGGCGCTGGAGTGGGGCGTGAAAAATAATGATGCAACTGTCAG
ACAGACCTCCTTGAAAAACAGGCTGTCCGTACAGGTTGAGGAAATGGATGCCGAGCTTGAAGCTTTGCAAAAAGAGCTCC
CGTTCAGCGTACACGACGCCAACATTGGCATGGAAGGCATTACACCATTCGATTTTATGAAAGAAGAACAGCAATAA

Domains

Predicted by InterproScan.

• Helix-hairpin-helix containing domain (HHH_RecD2) (158-248)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (594-662)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (681-729)

• AAA domain (AAA_30) (346-553)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	100	100	1