Detailed information NTG0184585

Bioinformatically predicted

Overview

• Name: recJ
• Type: Machinery gene
• Locus tag: B5D85_RS04050
• Genome accession: NZ_CP020082
• Coordinates: 758857..761067 (+)
• Length: 736 a.a.
• NCBI ID: WP_076639688.1
• Uniprot ID: -
• Organism: Streptococcus pyogenes strain STAB120304
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 753857..766067

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
B5D85_RS04020 (B5D85_04015)	-	754004..754180 (-)	177	WP_002984898.1	DUF3042 family protein	-
B5D85_RS04025 (B5D85_04020)	miaA	754314..755213 (+)	900	WP_002990117.1	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	-
B5D85_RS04030 (B5D85_04025)	hflX	755286..756524 (+)	1239	WP_030127486.1	GTPase HflX	-
B5D85_RS04035 (B5D85_04030)	-	756517..757152 (+)	636	WP_002990114.1	cystathionine beta-lyase	-
B5D85_RS04040 (B5D85_04035)	rnz	757167..758096 (+)	930	WP_023611152.1	ribonuclease Z	-
B5D85_RS04045 (B5D85_04040)	-	758096..758860 (+)	765	WP_002984893.1	SDR family NAD(P)-dependent oxidoreductase	-
B5D85_RS04050 (B5D85_04045)	recJ	758857..761067 (+)	2211	WP_076639688.1	single-stranded-DNA-specific exonuclease RecJ	Machinery gene
B5D85_RS04055 (B5D85_04050)	-	761217..761735 (+)	519	WP_002990109.1	adenine phosphoribosyltransferase	-
B5D85_RS04060 (B5D85_04055)	-	761816..762499 (+)	684	WP_002984890.1	DnaD domain-containing protein	-
B5D85_RS04065 (B5D85_04060)	nth	762496..763152 (+)	657	WP_002990106.1	endonuclease III	-
B5D85_RS04070 (B5D85_04065)	-	763224..763910 (+)	687	WP_020905114.1	tRNA (adenine(22)-N(1))-methyltransferase	-
B5D85_RS04075 (B5D85_04070)	-	763900..764688 (+)	789	WP_002984887.1	Nif3-like dinuclear metal center hexameric protein	-
B5D85_RS04080 (B5D85_04075)	-	764728..765834 (+)	1107	WP_076639687.1	NAD(P)/FAD-dependent oxidoreductase	-

Sequence

Protein

• Length: 736 a.a.
• Molecular weight: 82496.31 Da
• Isoelectric Point: 4.7530

>NTDB_id=184585 B5D85_RS04050 WP_076639688.1 758857..761067(+) (recJ) [Streptococcus pyogenes strain STAB120304]
MIKSKYSWKIKDKKPDDGFFKLAKTKGLTQTAAQLIYDRGIRTEEALDEFLTADLSQLHDPYLLHDMAKAVPRIRQAIEE
GERILIYGDYDADGMTSASIVKETLDMMGAEPLVYLPNRFTDGYGPNQSVYKYFIEQEAVSLIITVDNGVAGHEAIRYAQ
EQEVDVIVTDHHSLPEELPEAFAIIHPEHPDADYPFKHLAGCGVAFKLATALLESLPTDCLDLVAIGTIADMVSLTGENR
VLVKNGLAMLKHTERVGLQELMSLSPIDLEHFNEDAIGFQIAPQLNALGRLDDPNPAIELLTGFDDQEAQAIALMIKKKN
EERKALVQDIFDQAMAMVDPQKPVQVLAQAGWHPGVLGIVAGRIMETIGQTVVVLTIDNGFAKGSARSLEAINIFEALNG
KRELFTAFGGHAGAAGMTLPVDNLEALSDFLCQFVIERGLDQTAKNTLTIDESLSLDDLSLDILKSLDKLAPYGMDHQKP
VFYVKDIRVSQARTIGQDQSHLKFKVSQGKASFDVLAFGQGSQLQEFRQATGLELAVTLSVNHWNGNTSLQFMLVDARVD
GVQLLDLRTKTAKVPEGIPTIEEDPNARVILINDIPEDFKTWRNQFVHKDFDAIYFKNQMKHPYYLTGFGSREQFAKLYK
TIYQFPEFDLRHKLTELSHYLNIEKLLLIKLIQIFEELSFVTIDDGLMTVNPQAQKREISESHIYQDLKELVKFQEIMAL
ASPKEMYDYLVKSNDQ

Nucleotide

• Length: 2211 bp

>NTDB_id=184585 B5D85_RS04050 WP_076639688.1 758857..761067(+) (recJ) [Streptococcus pyogenes strain STAB120304]
ATGATTAAATCCAAATATAGCTGGAAAATAAAAGACAAGAAGCCAGATGATGGCTTCTTTAAGCTAGCAAAGACAAAAGG
TCTAACCCAGACCGCCGCTCAGTTGATTTATGATCGAGGGATAAGGACTGAAGAAGCCTTAGATGAGTTTTTAACAGCGG
ACTTGTCTCAACTGCATGATCCTTACTTGCTACATGACATGGCAAAAGCTGTGCCAAGAATTCGTCAAGCTATTGAAGAG
GGCGAACGAATTCTCATTTACGGCGACTATGATGCTGATGGCATGACGTCGGCTTCTATTGTCAAAGAAACCCTAGACAT
GATGGGAGCAGAGCCTTTGGTTTATCTTCCCAACCGCTTTACAGATGGCTATGGCCCCAACCAGAGCGTCTATAAATATT
TTATTGAGCAGGAAGCTGTGTCCCTAATTATCACGGTTGATAATGGCGTGGCCGGACATGAAGCGATTAGATATGCTCAA
GAACAGGAAGTTGATGTCATTGTAACTGACCATCATAGCCTGCCTGAAGAATTGCCAGAAGCCTTTGCCATCATTCATCC
TGAGCATCCTGATGCTGATTATCCCTTTAAACACTTAGCTGGCTGTGGCGTTGCCTTTAAATTGGCAACAGCTTTGCTAG
AAAGTTTACCAACAGACTGTCTAGACTTGGTAGCTATTGGAACCATTGCCGATATGGTAAGCTTGACAGGTGAAAACCGT
GTTTTAGTCAAAAATGGTCTGGCCATGCTCAAACACACCGAAAGAGTGGGCTTGCAGGAGTTGATGTCCTTGTCTCCTAT
TGATTTGGAACATTTTAATGAAGACGCCATTGGCTTTCAGATTGCTCCGCAATTAAATGCTTTAGGACGCTTAGATGACC
CTAATCCAGCCATTGAGCTACTGACGGGCTTTGATGACCAAGAAGCTCAAGCGATTGCCTTGATGATTAAGAAAAAAAAT
GAAGAGCGTAAGGCCTTAGTCCAAGACATTTTTGATCAAGCGATGGCTATGGTTGATCCTCAAAAACCTGTTCAAGTCTT
GGCACAAGCTGGCTGGCATCCTGGTGTTCTTGGGATTGTCGCTGGTCGTATCATGGAAACTATTGGACAAACGGTCGTCG
TTTTGACCATTGATAATGGCTTTGCAAAAGGCTCGGCCAGAAGTTTAGAAGCTATTAATATTTTTGAAGCCTTGAATGGC
AAGCGTGAGTTATTTACAGCCTTTGGGGGACATGCTGGTGCAGCAGGAATGACCCTGCCCGTTGACAACTTGGAAGCTCT
TTCAGACTTTCTTTGTCAGTTTGTGATAGAACGTGGCTTAGATCAGACTGCCAAAAATACGTTAACTATTGATGAAAGCC
TGTCTTTGGACGACCTTAGCCTTGATATTTTAAAGAGTTTAGATAAATTAGCCCCTTATGGGATGGATCATCAAAAGCCG
GTCTTTTATGTCAAGGACATAAGGGTTAGTCAAGCGCGTACCATAGGGCAAGACCAGAGCCATCTTAAATTTAAAGTCAG
TCAGGGCAAAGCTTCCTTTGACGTACTGGCTTTTGGTCAAGGAAGTCAACTGCAAGAGTTTCGACAAGCTACTGGTTTAG
AATTAGCAGTTACCTTATCTGTCAACCATTGGAATGGGAACACGAGTCTCCAATTCATGTTAGTAGATGCTCGTGTTGAC
GGAGTGCAACTTCTTGATTTAAGGACAAAAACAGCCAAAGTTCCTGAAGGTATTCCGACTATTGAAGAAGACCCAAATGC
CAGAGTCATTCTGATTAATGACATCCCTGAAGATTTCAAAACCTGGCGCAACCAGTTTGTTCACAAGGATTTTGACGCCA
TCTATTTTAAAAATCAGATGAAACATCCTTATTATTTAACAGGATTTGGCAGCAGAGAGCAGTTTGCCAAGCTCTACAAA
ACCATCTATCAGTTTCCTGAATTTGATTTACGGCATAAATTGACAGAGTTGAGTCACTATTTAAACATAGAAAAACTTTT
ACTGATTAAGTTGATTCAAATTTTTGAAGAGTTGTCTTTTGTGACGATTGACGATGGGCTGATGACGGTTAATCCCCAAG
CGCAAAAACGAGAGATTTCAGAGAGCCACATTTACCAAGACTTAAAAGAATTGGTGAAATTTCAAGAAATCATGGCTTTG
GCTAGCCCGAAAGAGATGTATGATTATTTGGTGAAATCAAACGATCAATAA

Domains

Predicted by InterProScan.

• RecJ OB domain (RecJ_OB) (450-556)

• Single-strand DNA-specific exonuclease, C terminal domain (ssDNA-exonuc_C) (588-729)

• DHHA1 domain (DHHA1) (317-435)

• DHH family (DHH) (83-228)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recJ	Streptococcus pneumoniae strain D39V	63.008	100	0.632
recJ	Bacillus subtilis subsp. subtilis str. 168	34.866	100	0.371