Detailed information NTG0184473

Bioinformatically predicted

Overview

• Name: uvrA
• Type: Machinery gene
• Locus tag: Vc3S01_RS02135
• Genome accession: NZ_CP020076
• Coordinates: 439594..442416 (-)
• Length: 940 a.a.
• NCBI ID: WP_077200162.1
• Uniprot ID: -
• Organism: Vibrio campbellii strain 20130629003S01
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 434594..447416

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
Vc3S01_RS02115 (Vc3S01_0372)	lysC	434685..436037 (-)	1353	WP_077200159.1	lysine-sensitive aspartokinase 3	-
Vc3S01_RS02125 (Vc3S01_0373)	-	436564..437685 (+)	1122	WP_077200160.1	alanine--glyoxylate aminotransferase family protein	-
Vc3S01_RS02130 (Vc3S01_0374)	-	437742..439526 (-)	1785	WP_077200161.1	PglL family O-oligosaccharyltransferase	-
Vc3S01_RS02135 (Vc3S01_0375)	uvrA	439594..442416 (-)	2823	WP_077200162.1	excinuclease ABC subunit UvrA	Machinery gene
Vc3S01_RS02140 (Vc3S01_0376)	galU	442555..443427 (-)	873	WP_005432802.1	UTP--glucose-1-phosphate uridylyltransferase GalU	-
Vc3S01_RS02145 (Vc3S01_0377)	qstR	443592..444236 (-)	645	WP_005432827.1	LuxR C-terminal-related transcriptional regulator	Regulator
Vc3S01_RS02150 (Vc3S01_0378)	ssb	444530..445066 (+)	537	WP_005432828.1	single-stranded DNA-binding protein	Machinery gene
Vc3S01_RS02155 (Vc3S01_0379)	csrD	445314..447323 (+)	2010	WP_077200163.1	RNase E specificity factor CsrD	-

Sequence

Protein

• Length: 940 a.a.
• Molecular weight: 103925.33 Da
• Isoelectric Point: 6.4806

>NTDB_id=184473 Vc3S01_RS02135 WP_077200162.1 439594..442416(-) (uvrA) [Vibrio campbellii strain 20130629003S01]
MDKIEVRGARTHNLKDINLTIPRDKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLSLMEKPDVDHIEGLS
PAISIEQKSTSHNPRSTVGTITEVYDYLRLLYARVGEPRCPTHHTPLAAQTISQMVDKVLELPEGSKMMLLAPIVKERKG
EHVKTLENLAAQGFIRARIDGETCDLSDPPPLELHKKHTIEVVVDRFKVRPDLQQRLAESFETTLELSGGIAVVAPMDGD
GEEVIFSANFACPICGYSMQELEPRLFSFNNPAGACGTCDGLGVQQYFDPSRVIQDETLSLAQGAIRGWDQKNYYYFQML
TALADHYGFDLHAPFNALPKKTQDIILKGSGRTEVEFKYINDRGDIRVKRHPFEGILNTLERRYRDTESNSVREELAKYI
STKSCSSCGGTRLRLEARNVFIADTTLPEIVELSIADALEFFHTLKLEGQRAQIAEKVMKEINDRLQFLVNVGLNYLNLS
RSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLKTLTHLRDLGNTVLVVEHDEDAIRCADHVIDIG
PGAGVHGGNVVAEGTMDEIIANPNSLTGQYLSGVKEIAVPKERTPRDPKKTVELLGATGNNLKNVDLSVPVGLFSCITGV
SGSGKSTLINDTFFKIAHTQLNGATTAHPSPYKAIKGLEHFDKVIDIDQSPIGRTPRSNPATYTGIFTPIRELFAGTQES
RSRGYKPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDVYVPCDVCKGKRYNRETLEVRYKGKTIDEVLEMTVEDARTFFD
PVPAIARKLQTLMDVGLSYIRLGQAATTLSGGEAQRVKLARELSKRDTGKTLYILDEPTTGLHFHDIQQLLTVLHRLRDH
GNTVVVIEHNLDVIKTADWIIDLGPEGGQGGGEIIAQGTPEDVSQIEGSHTARFLKPMLK

Nucleotide

• Length: 2823 bp

>NTDB_id=184473 Vc3S01_RS02135 WP_077200162.1 439594..442416(-) (uvrA) [Vibrio campbellii strain 20130629003S01]
ATGGATAAAATAGAAGTTCGTGGTGCCCGCACCCATAACCTCAAAGACATCAACCTCACTATCCCCCGCGATAAACTGAT
TGTCATTACTGGTTTGAGTGGTTCTGGTAAATCCTCTCTCGCATTCGACACTTTGTACGCTGAAGGTCAAAGACGTTACG
TAGAGTCACTATCAGCTTACGCGCGCCAATTTTTGTCTCTTATGGAAAAGCCAGATGTTGACCACATCGAAGGTTTGTCT
CCTGCGATCTCGATTGAGCAGAAATCAACATCACACAACCCACGTTCTACCGTCGGTACCATTACCGAGGTATACGATTA
CCTGCGTCTACTTTACGCTCGCGTTGGTGAGCCTCGTTGTCCGACGCACCATACGCCTCTAGCCGCTCAAACCATCAGCC
AGATGGTCGATAAAGTCTTAGAGTTGCCAGAAGGTAGCAAAATGATGCTACTTGCGCCTATTGTGAAAGAACGTAAAGGT
GAGCATGTTAAGACTCTAGAGAACCTCGCTGCTCAAGGTTTCATCCGCGCACGCATCGATGGTGAAACTTGCGATCTTTC
TGATCCACCGCCGTTAGAACTGCACAAGAAACACACTATCGAAGTGGTTGTGGACCGCTTTAAAGTTCGCCCAGATTTGC
AGCAACGTTTGGCTGAATCCTTCGAAACCACACTAGAGCTATCTGGTGGTATTGCTGTTGTTGCTCCAATGGACGGCGAC
GGCGAAGAGGTGATCTTCTCAGCTAACTTTGCTTGCCCTATTTGTGGCTACAGCATGCAAGAACTTGAGCCTCGTTTGTT
CTCATTCAACAACCCAGCGGGGGCGTGTGGCACTTGTGATGGTTTAGGTGTGCAGCAATATTTCGACCCAAGCCGAGTTA
TTCAAGATGAAACTCTGAGTTTGGCACAAGGTGCGATTCGAGGTTGGGATCAAAAGAACTACTATTATTTCCAGATGCTG
ACTGCGCTGGCGGATCATTACGGGTTCGATCTTCACGCACCATTTAACGCTCTACCAAAGAAAACCCAAGACATCATTCT
TAAAGGATCGGGGCGTACTGAAGTAGAGTTCAAGTACATTAACGATCGTGGTGACATTCGCGTTAAGCGCCATCCTTTTG
AAGGGATCCTGAATACACTTGAACGCCGTTACCGCGACACTGAATCTAACTCGGTACGTGAAGAGCTTGCGAAATACATC
TCTACCAAGTCTTGTTCAAGCTGTGGCGGTACTCGTCTGCGCCTTGAAGCTCGTAACGTCTTTATCGCCGATACGACACT
ACCGGAGATTGTTGAACTCAGCATCGCCGACGCATTGGAGTTCTTCCACACTTTGAAGCTTGAAGGCCAACGCGCCCAAA
TCGCTGAAAAAGTGATGAAGGAAATCAACGACCGCCTACAATTCCTGGTTAACGTTGGTTTGAACTACCTCAACTTATCA
CGCAGCGCGGAAACCTTATCAGGCGGTGAGGCTCAACGTATTCGTTTAGCGAGCCAAATTGGTGCGGGTCTAGTCGGTGT
TATGTACGTACTGGATGAGCCATCAATTGGTCTCCACCAGCGTGATAACGAACGTCTATTGAAAACTCTGACCCACTTAA
GAGATTTAGGTAACACGGTATTAGTGGTTGAGCACGATGAAGATGCGATTCGTTGTGCTGATCACGTGATCGATATCGGT
CCAGGCGCAGGTGTACACGGTGGTAACGTGGTCGCTGAAGGTACGATGGACGAGATCATTGCCAATCCGAACTCACTGAC
TGGTCAGTACCTCAGTGGCGTGAAAGAGATTGCGGTACCAAAAGAGCGTACACCACGCGATCCAAAGAAAACCGTTGAAC
TACTTGGCGCGACAGGTAACAACTTAAAGAATGTCGATCTTTCCGTTCCTGTTGGCTTGTTCAGCTGTATTACCGGTGTA
TCCGGCTCAGGTAAGTCGACTCTGATCAACGATACCTTCTTTAAGATTGCTCATACCCAGTTGAACGGCGCAACAACGGC
GCACCCTTCACCATACAAAGCGATCAAAGGTTTAGAGCACTTCGATAAAGTTATCGACATTGACCAAAGCCCTATCGGTC
GTACACCACGTTCAAACCCAGCCACTTACACGGGGATCTTTACTCCGATTCGTGAACTGTTTGCTGGCACGCAAGAGTCG
CGCTCTCGCGGTTACAAACCGGGGCGCTTTAGCTTTAACGTACGCGGTGGTCGCTGTGAGGCCTGTCAGGGCGATGGCGT
AATCAAGGTGGAAATGCACTTCCTCCCTGACGTCTACGTTCCTTGTGATGTGTGTAAAGGTAAACGCTACAACCGCGAAA
CACTTGAAGTACGTTATAAAGGCAAGACCATTGATGAAGTACTGGAAATGACGGTAGAAGATGCACGTACTTTCTTCGAT
CCAGTACCAGCGATTGCTCGTAAGCTGCAAACTCTGATGGATGTAGGTTTGTCTTACATTCGCTTAGGTCAAGCGGCAAC
TACGCTGTCAGGTGGTGAAGCTCAGCGTGTAAAACTGGCTCGAGAGCTATCTAAGCGTGATACAGGTAAAACCTTATACA
TTTTGGATGAGCCGACAACAGGTCTGCACTTCCACGATATCCAGCAGCTACTAACTGTACTGCACCGTCTGCGCGACCAC
GGAAATACCGTTGTCGTCATCGAACATAACCTCGATGTCATTAAGACGGCAGACTGGATTATCGACTTAGGCCCTGAAGG
TGGACAAGGTGGCGGTGAGATCATTGCACAAGGAACCCCTGAAGATGTGTCTCAGATCGAAGGTTCACACACAGCTCGCT
TCCTTAAGCCTATGTTGAAGTAG

Domains

Predicted by InterProScan.

• ABC transporter (ABC_tran) (622-859)

• UvrA interaction domain (UvrA_inter) (130-237)

• UvrA DNA-binding domain (UvrA_DNA-bind) (289-398)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
uvrA	Streptococcus pneumoniae R6	57.537	100	0.577
uvrA	Streptococcus pneumoniae TIGR4	57.537	100	0.577
uvrA	Streptococcus pneumoniae D39	57.537	100	0.577