Detailed information NTG0184419

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: AM440_RS14000
• Genome accession: NZ_CP020058
• Coordinates: 2719840..2720865 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain AR_0061
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 2714840..2725865

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AM440_RS13975 (AM440_14285)	metJ	2715277..2715594 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
AM440_RS13980 (AM440_14290)	yiiX	2715778..2716386 (+)	609	WP_000797341.1	YiiX family permuted papain-like enzyme	-
AM440_RS13985 (AM440_14295)	-	2716393..2717016 (+)	624	WP_000720774.1	TIGR02117 family protein	-
AM440_RS13990 (AM440_14300)	rpmE	2717071..2717283 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
AM440_RS13995 (AM440_14305)	priA	2717486..2719684 (+)	2199	WP_001295520.1	primosomal protein N'	Machinery gene
AM440_RS14000 (AM440_14310)	cytR	2719840..2720865 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
AM440_RS14005 (AM440_14315)	ftsN	2720957..2721916 (+)	960	WP_071598226.1	cell division protein FtsN	-
AM440_RS14010 (AM440_14320)	hslV	2722009..2722539 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
AM440_RS14015 (AM440_14325)	hslU	2722549..2723880 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
AM440_RS14020 (AM440_14330)	menA	2723947..2724873 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
AM440_RS14025 (AM440_14335)	rraA	2724966..2725451 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
AM440_RS14030 (AM440_14340)	zapB	2725536..2725781 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=184419 AM440_RS14000 WP_000644904.1 2719840..2720865(+) (cytR) [Escherichia coli strain AR_0061]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=184419 AM440_RS14000 WP_000644904.1 2719840..2720865(+) (cytR) [Escherichia coli strain AR_0061]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGTTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCAGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGTCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628