Detailed information
Bioinformatically predicted
Overview
| Name | lpp1978 | Type | Machinery gene |
| Locus tag | A9E88_RS10000 | Genome accession | NZ_CP015946 |
| Coordinates | 2249631..2249945 (-) | Length | 104 a.a. |
| NCBI ID | WP_010947713.1 | Uniprot ID | Q5ZU11 |
| Organism | Legionella pneumophila strain E1_P | ||
| Function | DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2244631..2254945
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A9E88_RS09975 (A9E88_09975) | - | 2245060..2245560 (-) | 501 | WP_015444348.1 | hypothetical protein | - |
| A9E88_RS09980 (A9E88_09980) | - | 2246052..2246912 (+) | 861 | WP_015444347.1 | polysaccharide deacetylase family protein | - |
| A9E88_RS09985 (A9E88_09985) | - | 2247029..2248222 (-) | 1194 | WP_010947710.1 | murein transglycosylase A | - |
| A9E88_RS09990 (A9E88_09990) | lpp1976 | 2248332..2248889 (-) | 558 | WP_010947711.1 | hypothetical protein | Machinery gene |
| A9E88_RS09995 (A9E88_09995) | lpp1977 | 2248886..2249692 (-) | 807 | WP_010947712.1 | PilW family protein | Machinery gene |
| A9E88_RS10000 (A9E88_10000) | lpp1978 | 2249631..2249945 (-) | 315 | WP_010947713.1 | type IV pilus modification PilV family protein | Machinery gene |
| A9E88_RS10005 (A9E88_10005) | hisC | 2250105..2251214 (+) | 1110 | WP_015444344.1 | histidinol-phosphate transaminase | - |
| A9E88_RS10010 (A9E88_10010) | - | 2251251..2251592 (+) | 342 | WP_010947715.1 | 4a-hydroxytetrahydrobiopterin dehydratase | - |
| A9E88_RS10015 (A9E88_10015) | secF | 2251765..2252682 (-) | 918 | WP_010947716.1 | protein translocase subunit SecF | - |
| A9E88_RS10020 (A9E88_10020) | secD | 2252695..2254551 (-) | 1857 | WP_010947717.1 | protein translocase subunit SecD | - |
| A9E88_RS10025 (A9E88_10025) | yajC | 2254573..2254908 (-) | 336 | WP_010947718.1 | preprotein translocase subunit YajC | - |
Sequence
Protein
Download Length: 104 a.a. Molecular weight: 12330.42 Da Isoelectric Point: 9.4609
>NTDB_id=184397 A9E88_RS10000 WP_010947713.1 2249631..2249945(-) (lpp1978) [Legionella pneumophila strain E1_P]
MSKHQGFTLMEVLVSLMLMTTVVLMLVEQQLKTRDIINHLIWRIQGSQYLDQVDEALYISENRLPLPPSNYHFDIRRSQK
KIILNVTWFKKSQSIIRSYDLDAH
MSKHQGFTLMEVLVSLMLMTTVVLMLVEQQLKTRDIINHLIWRIQGSQYLDQVDEALYISENRLPLPPSNYHFDIRRSQK
KIILNVTWFKKSQSIIRSYDLDAH
Nucleotide
Download Length: 315 bp
>NTDB_id=184397 A9E88_RS10000 WP_010947713.1 2249631..2249945(-) (lpp1978) [Legionella pneumophila strain E1_P]
ATGAGCAAGCATCAGGGTTTCACTCTAATGGAAGTACTTGTGTCATTAATGCTAATGACAACGGTAGTTCTGATGTTAGT
GGAACAACAGTTGAAAACCAGAGATATAATCAATCATCTTATTTGGCGAATTCAAGGTTCCCAATATCTAGATCAAGTAG
ATGAAGCATTATATATTAGTGAGAATAGACTCCCTCTGCCGCCTTCAAATTATCATTTTGATATCAGGAGATCTCAAAAG
AAAATCATTTTGAATGTTACGTGGTTTAAAAAAAGCCAGTCAATTATTCGCTCCTATGATCTGGATGCTCATTGA
ATGAGCAAGCATCAGGGTTTCACTCTAATGGAAGTACTTGTGTCATTAATGCTAATGACAACGGTAGTTCTGATGTTAGT
GGAACAACAGTTGAAAACCAGAGATATAATCAATCATCTTATTTGGCGAATTCAAGGTTCCCAATATCTAGATCAAGTAG
ATGAAGCATTATATATTAGTGAGAATAGACTCCCTCTGCCGCCTTCAAATTATCATTTTGATATCAGGAGATCTCAAAAG
AAAATCATTTTGAATGTTACGTGGTTTAAAAAAAGCCAGTCAATTATTCGCTCCTATGATCTGGATGCTCATTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| lpp1978 | Legionella pneumophila strain ERS1305867 |
96.154 |
100 |
0.962 |
| lpp1978 | Legionella pneumophila str. Paris |
94.231 |
100 |
0.942 |