Detailed information    

insolico Bioinformatically predicted

Overview


Name   pilZ   Type   Machinery gene
Locus tag   A9E88_RS07005 Genome accession   NZ_CP015946
Coordinates   1558489..1558830 (+) Length   113 a.a.
NCBI ID   WP_010947130.1    Uniprot ID   Q5ZVN9
Organism   Legionella pneumophila strain E1_P     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 1553489..1563830
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A9E88_RS06975 (A9E88_06975) fabG 1553489..1554232 (+) 744 WP_407716501.1 3-oxoacyl-ACP reductase FabG -
  A9E88_RS06980 (A9E88_06980) acpP 1554317..1554565 (+) 249 WP_003631752.1 acyl carrier protein -
  A9E88_RS06985 (A9E88_06985) fabF 1554585..1555823 (+) 1239 WP_010947126.1 beta-ketoacyl-ACP synthase II -
  A9E88_RS06990 (A9E88_06990) mltG 1555824..1556822 (+) 999 WP_010947127.1 endolytic transglycosylase MltG -
  A9E88_RS06995 (A9E88_06995) tmk 1556822..1557460 (+) 639 WP_010947128.1 dTMP kinase -
  A9E88_RS07000 (A9E88_07000) - 1557457..1558362 (+) 906 WP_010947129.1 DNA polymerase III subunit delta' -
  A9E88_RS07005 (A9E88_07005) pilZ 1558489..1558830 (+) 342 WP_010947130.1 PilZ domain-containing protein Machinery gene
  A9E88_RS07010 (A9E88_07010) - 1558886..1559674 (+) 789 WP_015444530.1 TatD family hydrolase -
  A9E88_RS07015 (A9E88_07015) - 1559786..1560886 (+) 1101 WP_010947132.1 anhydro-N-acetylmuramic acid kinase -
  A9E88_RS07020 (A9E88_07020) - 1560942..1562234 (+) 1293 WP_010947133.1 MFS transporter -
  A9E88_RS07025 (A9E88_07025) - 1562310..1563590 (-) 1281 WP_010947134.1 MFS transporter -

Sequence


Protein


Download         Length: 113 a.a.        Molecular weight: 12521.54 Da        Isoelectric Point: 8.2421

>NTDB_id=184382 A9E88_RS07005 WP_010947130.1 1558489..1558830(+) (pilZ) [Legionella pneumophila strain E1_P]
MTEKPQIINCSFPNEASLYMAYMPFVKGGGLFIRTQHVYSLGQSLELSVKLLNENEPYLVTGKIVWITPKGAQGNKPPGV
GIQFTGENSRYLCNKIETYLAGMLKSCQVTDTI

Nucleotide


Download         Length: 342 bp        

>NTDB_id=184382 A9E88_RS07005 WP_010947130.1 1558489..1558830(+) (pilZ) [Legionella pneumophila strain E1_P]
ATGACCGAAAAACCACAGATTATAAACTGCTCATTTCCCAATGAAGCATCTTTGTACATGGCTTACATGCCTTTTGTGAA
AGGTGGCGGTCTTTTTATAAGAACTCAACACGTTTATTCTCTAGGGCAGTCGCTTGAATTATCTGTTAAATTGCTCAATG
AAAATGAACCATATTTGGTCACTGGTAAAATAGTCTGGATTACTCCTAAAGGTGCACAAGGTAATAAGCCGCCGGGAGTT
GGTATTCAATTTACCGGTGAAAACAGTCGTTATCTATGTAACAAGATAGAAACTTATTTGGCAGGAATGCTAAAATCATG
TCAGGTTACAGATACTATATAG

Domains


Predicted by InterproScan.

(10-101)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB Q5ZVN9

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilZ Legionella pneumophila str. Paris

99.115

100

0.991

  pilZ Legionella pneumophila strain ERS1305867

99.115

100

0.991


Multiple sequence alignment