Detailed information
Bioinformatically predicted
Overview
| Name | lpp1978 | Type | Machinery gene |
| Locus tag | A9E84_RS09770 | Genome accession | NZ_CP015939 |
| Coordinates | 2203507..2203821 (-) | Length | 104 a.a. |
| NCBI ID | WP_010947713.1 | Uniprot ID | Q5ZU11 |
| Organism | Legionella pneumophila strain C8_S | ||
| Function | DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2198507..2208821
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A9E84_RS09745 (A9E84_09745) | - | 2198936..2199436 (-) | 501 | WP_015444348.1 | hypothetical protein | - |
| A9E84_RS09750 (A9E84_09750) | - | 2199928..2200788 (+) | 861 | WP_015444347.1 | polysaccharide deacetylase family protein | - |
| A9E84_RS09755 (A9E84_09755) | - | 2200905..2202098 (-) | 1194 | WP_010947710.1 | murein transglycosylase A | - |
| A9E84_RS09760 (A9E84_09760) | lpp1976 | 2202208..2202765 (-) | 558 | WP_010947711.1 | hypothetical protein | Machinery gene |
| A9E84_RS09765 (A9E84_09765) | lpp1977 | 2202762..2203568 (-) | 807 | WP_010947712.1 | PilW family protein | Machinery gene |
| A9E84_RS09770 (A9E84_09770) | lpp1978 | 2203507..2203821 (-) | 315 | WP_010947713.1 | type IV pilus modification PilV family protein | Machinery gene |
| A9E84_RS09775 (A9E84_09775) | hisC | 2203981..2205090 (+) | 1110 | WP_015444344.1 | histidinol-phosphate transaminase | - |
| A9E84_RS09780 (A9E84_09780) | - | 2205127..2205468 (+) | 342 | WP_010947715.1 | 4a-hydroxytetrahydrobiopterin dehydratase | - |
| A9E84_RS09785 (A9E84_09785) | secF | 2205641..2206558 (-) | 918 | WP_010947716.1 | protein translocase subunit SecF | - |
| A9E84_RS09790 (A9E84_09790) | secD | 2206571..2208427 (-) | 1857 | WP_010947717.1 | protein translocase subunit SecD | - |
| A9E84_RS09795 (A9E84_09795) | yajC | 2208449..2208784 (-) | 336 | WP_010947718.1 | preprotein translocase subunit YajC | - |
Sequence
Protein
Download Length: 104 a.a. Molecular weight: 12330.42 Da Isoelectric Point: 9.4609
>NTDB_id=184229 A9E84_RS09770 WP_010947713.1 2203507..2203821(-) (lpp1978) [Legionella pneumophila strain C8_S]
MSKHQGFTLMEVLVSLMLMTTVVLMLVEQQLKTRDIINHLIWRIQGSQYLDQVDEALYISENRLPLPPSNYHFDIRRSQK
KIILNVTWFKKSQSIIRSYDLDAH
MSKHQGFTLMEVLVSLMLMTTVVLMLVEQQLKTRDIINHLIWRIQGSQYLDQVDEALYISENRLPLPPSNYHFDIRRSQK
KIILNVTWFKKSQSIIRSYDLDAH
Nucleotide
Download Length: 315 bp
>NTDB_id=184229 A9E84_RS09770 WP_010947713.1 2203507..2203821(-) (lpp1978) [Legionella pneumophila strain C8_S]
ATGAGCAAGCATCAGGGTTTCACTCTAATGGAAGTACTTGTGTCATTAATGCTAATGACAACGGTAGTTCTGATGTTAGT
GGAACAACAGTTGAAAACCAGAGATATAATCAATCATCTTATTTGGCGAATTCAAGGTTCCCAATATCTAGATCAAGTAG
ATGAAGCATTATATATTAGTGAGAATAGACTCCCTCTGCCGCCTTCAAATTATCATTTTGATATCAGGAGATCTCAAAAG
AAAATCATTTTGAATGTTACGTGGTTTAAAAAAAGCCAGTCAATTATTCGCTCCTATGATCTGGATGCTCATTGA
ATGAGCAAGCATCAGGGTTTCACTCTAATGGAAGTACTTGTGTCATTAATGCTAATGACAACGGTAGTTCTGATGTTAGT
GGAACAACAGTTGAAAACCAGAGATATAATCAATCATCTTATTTGGCGAATTCAAGGTTCCCAATATCTAGATCAAGTAG
ATGAAGCATTATATATTAGTGAGAATAGACTCCCTCTGCCGCCTTCAAATTATCATTTTGATATCAGGAGATCTCAAAAG
AAAATCATTTTGAATGTTACGTGGTTTAAAAAAAGCCAGTCAATTATTCGCTCCTATGATCTGGATGCTCATTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| lpp1978 | Legionella pneumophila strain ERS1305867 |
96.154 |
100 |
0.962 |
| lpp1978 | Legionella pneumophila str. Paris |
94.231 |
100 |
0.942 |