Detailed information
Bioinformatically predicted
Overview
| Name | waaF | Type | Regulator |
| Locus tag | B5D75_RS05495 | Genome accession | NZ_CP020045 |
| Coordinates | 1073146..1074096 (+) | Length | 316 a.a. |
| NCBI ID | WP_002853794.1 | Uniprot ID | - |
| Organism | Campylobacter jejuni subsp. jejuni strain ATCC 35925 | ||
| Function | repress natural transformation (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1068146..1079096
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| B5D75_RS05470 (B5D75_05470) | - | 1068211..1069098 (-) | 888 | WP_052803913.1 | glycosyltransferase family 2 protein | - |
| B5D75_RS05475 (B5D75_05475) | - | 1069091..1070299 (-) | 1209 | WP_044306107.1 | glycosyltransferase family 2 protein | - |
| B5D75_RS08445 | - | 1070377..1070784 (-) | 408 | WP_052500184.1 | hypothetical protein | - |
| B5D75_RS08530 | - | 1071023..1071344 (-) | 322 | Protein_1054 | glycosyltransferase family 2 protein | - |
| B5D75_RS05485 (B5D75_05485) | - | 1071337..1072224 (-) | 888 | WP_052803914.1 | glycosyltransferase | - |
| B5D75_RS05490 (B5D75_05490) | waaV | 1072278..1073087 (-) | 810 | WP_044306108.1 | glycosyltransferase family 2 protein | - |
| B5D75_RS05495 (B5D75_05495) | waaF | 1073146..1074096 (+) | 951 | WP_002853794.1 | glycosyltransferase family 9 protein | Regulator |
| B5D75_RS05500 (B5D75_05500) | - | 1074082..1074846 (-) | 765 | WP_044306109.1 | glycosyltransferase family 25 protein | - |
| B5D75_RS05505 (B5D75_05505) | gmhA | 1074846..1075406 (-) | 561 | WP_023890815.1 | D-sedoheptulose 7-phosphate isomerase | - |
| B5D75_RS05510 (B5D75_05510) | rfaE1 | 1075403..1076788 (-) | 1386 | WP_044306110.1 | D-glycero-beta-D-manno-heptose-7-phosphate kinase | - |
| B5D75_RS05515 (B5D75_05515) | rfaD | 1076781..1077734 (-) | 954 | WP_044306111.1 | ADP-glyceromanno-heptose 6-epimerase | - |
| B5D75_RS05520 (B5D75_05520) | gmhB | 1077735..1078295 (-) | 561 | WP_002853963.1 | D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase | - |
| B5D75_RS05525 (B5D75_05525) | - | 1078377..1078679 (+) | 303 | WP_002852762.1 | c-type cytochrome | - |
| B5D75_RS05530 (B5D75_05530) | ccoS | 1078702..1078908 (-) | 207 | WP_002877126.1 | cbb3-type cytochrome oxidase assembly protein CcoS | - |
Sequence
Protein
Download Length: 316 a.a. Molecular weight: 36225.73 Da Isoelectric Point: 10.2421
>NTDB_id=184199 B5D75_RS05495 WP_002853794.1 1073146..1074096(+) (waaF) [Campylobacter jejuni subsp. jejuni strain ATCC 35925]
MKIFIHLPTWLGDAVMASPALYAIKEHFKNAQFILYGSLVSTALFKEFPNSKIIIENKQSRYKQALSLRKELGKIDFSFA
FRSAFSSKIILHILKTKQRYFFDKNKHKEEHQVLKYLYFIENSLSIKAHFKDLKLPFKLKFQNPLVLKNGKKILGLNPGA
SFGSAKRWDVSYFAKVALNFSQSHEILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHISAVYKVKTVAIFGPTKFTQTSPWQNENATLVHLDLACMPCMQKTCPLKHHKCMKDLKPEVIVKAIQNLTNI
MKIFIHLPTWLGDAVMASPALYAIKEHFKNAQFILYGSLVSTALFKEFPNSKIIIENKQSRYKQALSLRKELGKIDFSFA
FRSAFSSKIILHILKTKQRYFFDKNKHKEEHQVLKYLYFIENSLSIKAHFKDLKLPFKLKFQNPLVLKNGKKILGLNPGA
SFGSAKRWDVSYFAKVALNFSQSHEILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHISAVYKVKTVAIFGPTKFTQTSPWQNENATLVHLDLACMPCMQKTCPLKHHKCMKDLKPEVIVKAIQNLTNI
Nucleotide
Download Length: 951 bp
>NTDB_id=184199 B5D75_RS05495 WP_002853794.1 1073146..1074096(+) (waaF) [Campylobacter jejuni subsp. jejuni strain ATCC 35925]
ATGAAAATTTTTATACACCTTCCCACTTGGCTAGGCGATGCAGTGATGGCTTCGCCTGCTTTATACGCTATAAAAGAACA
TTTTAAAAATGCTCAGTTTATCCTTTATGGATCTTTGGTTTCCACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACAATCTCGCTATAAACAAGCCCTATCTTTACGCAAAGAACTTGGCAAAATCGATTTTAGCTTTGCT
TTTAGGTCTGCGTTTTCTTCTAAGATTATCTTACATATTCTTAAAACAAAGCAAAGATATTTTTTTGACAAAAACAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACTCACTTAGTATAAAAGCTCATTTTAAAGACTTAA
AGCTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTGTCTTAAAAAATGGTAAAAAAATTCTAGGACTCAACCCTGGCGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGTGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGAGATTTT
AATCTTTGGTGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACTACCATCAAAACCCTTTGTCAAAATATTGCTTTTTGTGATCTTTTCATCACAAACGACAGT
GGACCTATGCACATAAGTGCGGTTTATAAGGTAAAAACCGTGGCTATTTTTGGCCCTACGAAATTTACTCAAACTTCACC
TTGGCAAAATGAAAATGCAACATTAGTGCATTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAACCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATTTAAAGCCTGAAGTGATTGTAAAAGCGATTCAAAATTTAACTAATATCTAA
ATGAAAATTTTTATACACCTTCCCACTTGGCTAGGCGATGCAGTGATGGCTTCGCCTGCTTTATACGCTATAAAAGAACA
TTTTAAAAATGCTCAGTTTATCCTTTATGGATCTTTGGTTTCCACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACAATCTCGCTATAAACAAGCCCTATCTTTACGCAAAGAACTTGGCAAAATCGATTTTAGCTTTGCT
TTTAGGTCTGCGTTTTCTTCTAAGATTATCTTACATATTCTTAAAACAAAGCAAAGATATTTTTTTGACAAAAACAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACTCACTTAGTATAAAAGCTCATTTTAAAGACTTAA
AGCTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTGTCTTAAAAAATGGTAAAAAAATTCTAGGACTCAACCCTGGCGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGTGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGAGATTTT
AATCTTTGGTGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACTACCATCAAAACCCTTTGTCAAAATATTGCTTTTTGTGATCTTTTCATCACAAACGACAGT
GGACCTATGCACATAAGTGCGGTTTATAAGGTAAAAACCGTGGCTATTTTTGGCCCTACGAAATTTACTCAAACTTCACC
TTGGCAAAATGAAAATGCAACATTAGTGCATTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAACCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATTTAAAGCCTGAAGTGATTGTAAAAGCGATTCAAAATTTAACTAATATCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| waaF | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
93.61 |
99.051 |
0.927 |