Detailed information
Bioinformatically predicted
Overview
| Name | fimT | Type | Machinery gene |
| Locus tag | A9E83_RS03115 | Genome accession | NZ_CP015938 |
| Coordinates | 668595..669302 (-) | Length | 235 a.a. |
| NCBI ID | WP_014843471.1 | Uniprot ID | - |
| Organism | Legionella pneumophila strain C7_O | ||
| Function | DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 663595..674302
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A9E83_RS03100 (A9E83_03100) | - | 666471..666983 (-) | 513 | WP_014843468.1 | pilus assembly protein | - |
| A9E83_RS03105 (A9E83_03105) | - | 666980..668047 (-) | 1068 | WP_014843469.1 | PilW family protein | - |
| A9E83_RS03110 (A9E83_03110) | pilV | 668044..668583 (-) | 540 | WP_027224585.1 | type IV pilus modification protein PilV | - |
| A9E83_RS03115 (A9E83_03115) | fimT | 668595..669302 (-) | 708 | WP_014843471.1 | GspH/FimT family pseudopilin | Machinery gene |
| A9E83_RS03120 (A9E83_03120) | - | 669522..670382 (-) | 861 | WP_070205564.1 | polysaccharide deacetylase family protein | - |
| A9E83_RS03125 (A9E83_03125) | - | 670559..671908 (-) | 1350 | WP_010946371.1 | lpg0634 family Dot/Icm T4SS effector | - |
| A9E83_RS03130 (A9E83_03130) | - | 672196..673677 (+) | 1482 | WP_010946372.1 | phospholipid carrier-dependent glycosyltransferase | - |
Sequence
Protein
Download Length: 235 a.a. Molecular weight: 24934.66 Da Isoelectric Point: 8.2443
>NTDB_id=184163 A9E83_RS03115 WP_014843471.1 668595..669302(-) (fimT) [Legionella pneumophila strain C7_O]
MNKVITESQKLTLRNLANMLFCVESSVLPTKSNIAQKIQTKGIMYNNLCKDSFDTEVPLNSNPLSIAGFTLVELLVTLSV
FAIILTLIVPSLRTMILNNRLTSNIDSLVSSLNYARGVALDRAVNVAVCPLGSPGSTACGTNWSSGWIVVTQPVAGAPTL
LKSHQTSVNDPVITSNVSSVVFDPHGLSTTQSNFTMCDNRGNAFARSAMVLATGFVQSGSTPGQAVWNNGALNCP
MNKVITESQKLTLRNLANMLFCVESSVLPTKSNIAQKIQTKGIMYNNLCKDSFDTEVPLNSNPLSIAGFTLVELLVTLSV
FAIILTLIVPSLRTMILNNRLTSNIDSLVSSLNYARGVALDRAVNVAVCPLGSPGSTACGTNWSSGWIVVTQPVAGAPTL
LKSHQTSVNDPVITSNVSSVVFDPHGLSTTQSNFTMCDNRGNAFARSAMVLATGFVQSGSTPGQAVWNNGALNCP
Nucleotide
Download Length: 708 bp
>NTDB_id=184163 A9E83_RS03115 WP_014843471.1 668595..669302(-) (fimT) [Legionella pneumophila strain C7_O]
TTGAACAAAGTGATAACGGAATCACAAAAGCTCACTCTACGCAACTTAGCTAATATGTTATTTTGCGTTGAGAGTAGTGT
ATTGCCTACTAAATCTAATATAGCACAAAAGATACAAACAAAAGGCATAATGTACAATAATCTTTGTAAAGACAGCTTCG
ATACTGAGGTCCCTCTTAACAGCAACCCTCTTTCCATAGCCGGATTCACACTGGTTGAATTATTAGTAACCCTATCTGTT
TTTGCTATCATCTTAACTCTAATCGTCCCTTCATTAAGAACTATGATTTTGAATAACCGTTTGACTTCAAACATTGACTC
ACTGGTAAGCTCATTAAACTATGCGCGTGGAGTGGCACTTGATCGGGCAGTCAATGTGGCAGTATGTCCATTAGGTTCAC
CAGGTTCAACGGCCTGTGGAACCAACTGGAGCTCAGGATGGATAGTAGTGACCCAACCAGTAGCAGGAGCACCAACGCTT
TTAAAATCGCACCAGACCTCAGTGAATGATCCTGTTATCACTTCGAACGTATCCAGTGTTGTTTTTGACCCACATGGGTT
ATCAACAACCCAAAGTAACTTCACTATGTGTGATAACAGAGGAAATGCATTTGCCCGCTCGGCAATGGTTTTGGCCACCG
GATTTGTCCAATCCGGATCAACACCCGGCCAAGCAGTCTGGAATAATGGAGCTCTGAACTGCCCTTAA
TTGAACAAAGTGATAACGGAATCACAAAAGCTCACTCTACGCAACTTAGCTAATATGTTATTTTGCGTTGAGAGTAGTGT
ATTGCCTACTAAATCTAATATAGCACAAAAGATACAAACAAAAGGCATAATGTACAATAATCTTTGTAAAGACAGCTTCG
ATACTGAGGTCCCTCTTAACAGCAACCCTCTTTCCATAGCCGGATTCACACTGGTTGAATTATTAGTAACCCTATCTGTT
TTTGCTATCATCTTAACTCTAATCGTCCCTTCATTAAGAACTATGATTTTGAATAACCGTTTGACTTCAAACATTGACTC
ACTGGTAAGCTCATTAAACTATGCGCGTGGAGTGGCACTTGATCGGGCAGTCAATGTGGCAGTATGTCCATTAGGTTCAC
CAGGTTCAACGGCCTGTGGAACCAACTGGAGCTCAGGATGGATAGTAGTGACCCAACCAGTAGCAGGAGCACCAACGCTT
TTAAAATCGCACCAGACCTCAGTGAATGATCCTGTTATCACTTCGAACGTATCCAGTGTTGTTTTTGACCCACATGGGTT
ATCAACAACCCAAAGTAACTTCACTATGTGTGATAACAGAGGAAATGCATTTGCCCGCTCGGCAATGGTTTTGGCCACCG
GATTTGTCCAATCCGGATCAACACCCGGCCAAGCAGTCTGGAATAATGGAGCTCTGAACTGCCCTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| fimT | Legionella pneumophila strain Lp02 |
95.745 |
100 |
0.957 |