Detailed information    

insolico Bioinformatically predicted

Overview


Name   pilZ   Type   Machinery gene
Locus tag   A9E82_RS06765 Genome accession   NZ_CP015937
Coordinates   1509644..1509985 (+) Length   113 a.a.
NCBI ID   WP_010947130.1    Uniprot ID   Q5ZVN9
Organism   Legionella pneumophila strain C6_S     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 1504644..1514985
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A9E82_RS06735 (A9E82_06735) fabG 1504644..1505387 (+) 744 WP_407716501.1 3-oxoacyl-ACP reductase FabG -
  A9E82_RS06740 (A9E82_06740) acpP 1505472..1505720 (+) 249 WP_003631752.1 acyl carrier protein -
  A9E82_RS06745 (A9E82_06745) fabF 1505740..1506978 (+) 1239 WP_010947126.1 beta-ketoacyl-ACP synthase II -
  A9E82_RS06750 (A9E82_06750) mltG 1506979..1507977 (+) 999 WP_010947127.1 endolytic transglycosylase MltG -
  A9E82_RS06755 (A9E82_06755) tmk 1507977..1508615 (+) 639 WP_010947128.1 dTMP kinase -
  A9E82_RS06760 (A9E82_06760) - 1508612..1509517 (+) 906 WP_010947129.1 DNA polymerase III subunit delta' -
  A9E82_RS06765 (A9E82_06765) pilZ 1509644..1509985 (+) 342 WP_010947130.1 PilZ domain-containing protein Machinery gene
  A9E82_RS06770 (A9E82_06770) - 1510041..1510829 (+) 789 WP_015444530.1 TatD family hydrolase -
  A9E82_RS06775 (A9E82_06775) - 1510941..1512041 (+) 1101 WP_010947132.1 anhydro-N-acetylmuramic acid kinase -
  A9E82_RS06780 (A9E82_06780) - 1512097..1513389 (+) 1293 WP_010947133.1 MFS transporter -
  A9E82_RS06785 (A9E82_06785) - 1513465..1514745 (-) 1281 WP_010947134.1 MFS transporter -

Sequence


Protein


Download         Length: 113 a.a.        Molecular weight: 12521.54 Da        Isoelectric Point: 8.2421

>NTDB_id=184130 A9E82_RS06765 WP_010947130.1 1509644..1509985(+) (pilZ) [Legionella pneumophila strain C6_S]
MTEKPQIINCSFPNEASLYMAYMPFVKGGGLFIRTQHVYSLGQSLELSVKLLNENEPYLVTGKIVWITPKGAQGNKPPGV
GIQFTGENSRYLCNKIETYLAGMLKSCQVTDTI

Nucleotide


Download         Length: 342 bp        

>NTDB_id=184130 A9E82_RS06765 WP_010947130.1 1509644..1509985(+) (pilZ) [Legionella pneumophila strain C6_S]
ATGACCGAAAAACCACAGATTATAAACTGCTCATTTCCCAATGAAGCATCTTTGTACATGGCTTACATGCCTTTTGTGAA
AGGTGGCGGTCTTTTTATAAGAACTCAACACGTTTATTCTCTAGGGCAGTCGCTTGAATTATCTGTTAAATTGCTCAATG
AAAATGAACCATATTTGGTCACTGGTAAAATAGTCTGGATTACTCCTAAAGGTGCACAAGGTAATAAGCCGCCGGGAGTT
GGTATTCAATTTACCGGTGAAAACAGTCGTTATCTATGTAACAAGATAGAAACTTATTTGGCAGGAATGCTAAAATCATG
TCAGGTTACAGATACTATATAG

Domains


Predicted by InterproScan.

(10-101)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB Q5ZVN9

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilZ Legionella pneumophila str. Paris

99.115

100

0.991

  pilZ Legionella pneumophila strain ERS1305867

99.115

100

0.991


Multiple sequence alignment