Detailed information
Bioinformatically predicted
Overview
| Name | lpp1978 | Type | Machinery gene |
| Locus tag | A9E80_RS09760 | Genome accession | NZ_CP015935 |
| Coordinates | 2192879..2193193 (-) | Length | 104 a.a. |
| NCBI ID | WP_010947713.1 | Uniprot ID | Q5ZU11 |
| Organism | Legionella pneumophila strain C4_S | ||
| Function | DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2187879..2198193
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A9E80_RS09735 (A9E80_09735) | - | 2188308..2188808 (-) | 501 | WP_015444348.1 | hypothetical protein | - |
| A9E80_RS09740 (A9E80_09740) | - | 2189300..2190160 (+) | 861 | WP_015444347.1 | polysaccharide deacetylase family protein | - |
| A9E80_RS09745 (A9E80_09745) | - | 2190277..2191470 (-) | 1194 | WP_010947710.1 | murein transglycosylase A | - |
| A9E80_RS09750 (A9E80_09750) | lpp1976 | 2191580..2192137 (-) | 558 | WP_010947711.1 | hypothetical protein | Machinery gene |
| A9E80_RS09755 (A9E80_09755) | lpp1977 | 2192134..2192940 (-) | 807 | WP_010947712.1 | PilW family protein | Machinery gene |
| A9E80_RS09760 (A9E80_09760) | lpp1978 | 2192879..2193193 (-) | 315 | WP_010947713.1 | type IV pilus modification PilV family protein | Machinery gene |
| A9E80_RS09765 (A9E80_09765) | hisC | 2193353..2194462 (+) | 1110 | WP_015444344.1 | histidinol-phosphate transaminase | - |
| A9E80_RS09770 (A9E80_09770) | - | 2194499..2194840 (+) | 342 | WP_010947715.1 | 4a-hydroxytetrahydrobiopterin dehydratase | - |
| A9E80_RS09775 (A9E80_09775) | secF | 2195013..2195930 (-) | 918 | WP_010947716.1 | protein translocase subunit SecF | - |
| A9E80_RS09780 (A9E80_09780) | secD | 2195943..2197799 (-) | 1857 | WP_010947717.1 | protein translocase subunit SecD | - |
| A9E80_RS09785 (A9E80_09785) | yajC | 2197821..2198156 (-) | 336 | WP_010947718.1 | preprotein translocase subunit YajC | - |
Sequence
Protein
Download Length: 104 a.a. Molecular weight: 12330.42 Da Isoelectric Point: 9.4609
>NTDB_id=184061 A9E80_RS09760 WP_010947713.1 2192879..2193193(-) (lpp1978) [Legionella pneumophila strain C4_S]
MSKHQGFTLMEVLVSLMLMTTVVLMLVEQQLKTRDIINHLIWRIQGSQYLDQVDEALYISENRLPLPPSNYHFDIRRSQK
KIILNVTWFKKSQSIIRSYDLDAH
MSKHQGFTLMEVLVSLMLMTTVVLMLVEQQLKTRDIINHLIWRIQGSQYLDQVDEALYISENRLPLPPSNYHFDIRRSQK
KIILNVTWFKKSQSIIRSYDLDAH
Nucleotide
Download Length: 315 bp
>NTDB_id=184061 A9E80_RS09760 WP_010947713.1 2192879..2193193(-) (lpp1978) [Legionella pneumophila strain C4_S]
ATGAGCAAGCATCAGGGTTTCACTCTAATGGAAGTACTTGTGTCATTAATGCTAATGACAACGGTAGTTCTGATGTTAGT
GGAACAACAGTTGAAAACCAGAGATATAATCAATCATCTTATTTGGCGAATTCAAGGTTCCCAATATCTAGATCAAGTAG
ATGAAGCATTATATATTAGTGAGAATAGACTCCCTCTGCCGCCTTCAAATTATCATTTTGATATCAGGAGATCTCAAAAG
AAAATCATTTTGAATGTTACGTGGTTTAAAAAAAGCCAGTCAATTATTCGCTCCTATGATCTGGATGCTCATTGA
ATGAGCAAGCATCAGGGTTTCACTCTAATGGAAGTACTTGTGTCATTAATGCTAATGACAACGGTAGTTCTGATGTTAGT
GGAACAACAGTTGAAAACCAGAGATATAATCAATCATCTTATTTGGCGAATTCAAGGTTCCCAATATCTAGATCAAGTAG
ATGAAGCATTATATATTAGTGAGAATAGACTCCCTCTGCCGCCTTCAAATTATCATTTTGATATCAGGAGATCTCAAAAG
AAAATCATTTTGAATGTTACGTGGTTTAAAAAAAGCCAGTCAATTATTCGCTCCTATGATCTGGATGCTCATTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| lpp1978 | Legionella pneumophila strain ERS1305867 |
96.154 |
100 |
0.962 |
| lpp1978 | Legionella pneumophila str. Paris |
94.231 |
100 |
0.942 |