Detailed information
Bioinformatically predicted
Overview
| Name | lpp1978 | Type | Machinery gene |
| Locus tag | A9E77_RS09810 | Genome accession | NZ_CP015932 |
| Coordinates | 2212697..2213011 (-) | Length | 104 a.a. |
| NCBI ID | WP_010947713.1 | Uniprot ID | Q5ZU11 |
| Organism | Legionella pneumophila strain C1_S | ||
| Function | DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2207697..2218011
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A9E77_RS09785 (A9E77_09785) | - | 2208126..2208626 (-) | 501 | WP_015444348.1 | hypothetical protein | - |
| A9E77_RS09790 (A9E77_09790) | - | 2209118..2209978 (+) | 861 | WP_015444347.1 | polysaccharide deacetylase family protein | - |
| A9E77_RS09795 (A9E77_09795) | - | 2210095..2211288 (-) | 1194 | WP_010947710.1 | murein transglycosylase A | - |
| A9E77_RS09800 (A9E77_09800) | lpp1976 | 2211398..2211955 (-) | 558 | WP_010947711.1 | hypothetical protein | Machinery gene |
| A9E77_RS09805 (A9E77_09805) | lpp1977 | 2211952..2212758 (-) | 807 | WP_010947712.1 | hypothetical protein | Machinery gene |
| A9E77_RS09810 (A9E77_09810) | lpp1978 | 2212697..2213011 (-) | 315 | WP_010947713.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | Machinery gene |
| A9E77_RS09815 (A9E77_09815) | hisC | 2213171..2214280 (+) | 1110 | WP_015444344.1 | histidinol-phosphate transaminase | - |
| A9E77_RS09820 (A9E77_09820) | - | 2214317..2214658 (+) | 342 | WP_010947715.1 | 4a-hydroxytetrahydrobiopterin dehydratase | - |
| A9E77_RS09825 (A9E77_09825) | secF | 2214831..2215748 (-) | 918 | WP_010947716.1 | protein translocase subunit SecF | - |
| A9E77_RS09830 (A9E77_09830) | secD | 2215761..2217617 (-) | 1857 | WP_010947717.1 | protein translocase subunit SecD | - |
| A9E77_RS09835 (A9E77_09835) | yajC | 2217639..2217974 (-) | 336 | WP_010947718.1 | preprotein translocase subunit YajC | - |
Sequence
Protein
Download Length: 104 a.a. Molecular weight: 12330.42 Da Isoelectric Point: 9.4609
>NTDB_id=183935 A9E77_RS09810 WP_010947713.1 2212697..2213011(-) (lpp1978) [Legionella pneumophila strain C1_S]
MSKHQGFTLMEVLVSLMLMTTVVLMLVEQQLKTRDIINHLIWRIQGSQYLDQVDEALYISENRLPLPPSNYHFDIRRSQK
KIILNVTWFKKSQSIIRSYDLDAH
MSKHQGFTLMEVLVSLMLMTTVVLMLVEQQLKTRDIINHLIWRIQGSQYLDQVDEALYISENRLPLPPSNYHFDIRRSQK
KIILNVTWFKKSQSIIRSYDLDAH
Nucleotide
Download Length: 315 bp
>NTDB_id=183935 A9E77_RS09810 WP_010947713.1 2212697..2213011(-) (lpp1978) [Legionella pneumophila strain C1_S]
ATGAGCAAGCATCAGGGTTTCACTCTAATGGAAGTACTTGTGTCATTAATGCTAATGACAACGGTAGTTCTGATGTTAGT
GGAACAACAGTTGAAAACCAGAGATATAATCAATCATCTTATTTGGCGAATTCAAGGTTCCCAATATCTAGATCAAGTAG
ATGAAGCATTATATATTAGTGAGAATAGACTCCCTCTGCCGCCTTCAAATTATCATTTTGATATCAGGAGATCTCAAAAG
AAAATCATTTTGAATGTTACGTGGTTTAAAAAAAGCCAGTCAATTATTCGCTCCTATGATCTGGATGCTCATTGA
ATGAGCAAGCATCAGGGTTTCACTCTAATGGAAGTACTTGTGTCATTAATGCTAATGACAACGGTAGTTCTGATGTTAGT
GGAACAACAGTTGAAAACCAGAGATATAATCAATCATCTTATTTGGCGAATTCAAGGTTCCCAATATCTAGATCAAGTAG
ATGAAGCATTATATATTAGTGAGAATAGACTCCCTCTGCCGCCTTCAAATTATCATTTTGATATCAGGAGATCTCAAAAG
AAAATCATTTTGAATGTTACGTGGTTTAAAAAAAGCCAGTCAATTATTCGCTCCTATGATCTGGATGCTCATTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| lpp1978 | Legionella pneumophila strain ERS1305867 |
96.154 |
100 |
0.962 |
| lpp1978 | Legionella pneumophila str. Paris |
94.231 |
100 |
0.942 |