Detailed information
Bioinformatically predicted
Overview
| Name | lpp1978 | Type | Machinery gene |
| Locus tag | A9F01_RS09995 | Genome accession | NZ_CP015930 |
| Coordinates | 2247482..2247796 (-) | Length | 104 a.a. |
| NCBI ID | WP_010947713.1 | Uniprot ID | Q5ZU11 |
| Organism | Legionella pneumophila strain Philadelphia_3 | ||
| Function | DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2242482..2252796
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A9F01_RS09970 (A9F01_09970) | - | 2242911..2243411 (-) | 501 | WP_015444348.1 | hypothetical protein | - |
| A9F01_RS09975 (A9F01_09975) | - | 2243903..2244763 (+) | 861 | WP_015444347.1 | polysaccharide deacetylase family protein | - |
| A9F01_RS09980 (A9F01_09980) | - | 2244880..2246073 (-) | 1194 | WP_010947710.1 | murein transglycosylase A | - |
| A9F01_RS09985 (A9F01_09985) | lpp1976 | 2246183..2246740 (-) | 558 | WP_010947711.1 | hypothetical protein | Machinery gene |
| A9F01_RS09990 (A9F01_09990) | lpp1977 | 2246737..2247543 (-) | 807 | WP_010947712.1 | hypothetical protein | Machinery gene |
| A9F01_RS09995 (A9F01_09995) | lpp1978 | 2247482..2247796 (-) | 315 | WP_010947713.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | Machinery gene |
| A9F01_RS10000 (A9F01_10000) | hisC | 2247956..2249065 (+) | 1110 | WP_015444344.1 | histidinol-phosphate transaminase | - |
| A9F01_RS10005 (A9F01_10005) | - | 2249102..2249443 (+) | 342 | WP_010947715.1 | 4a-hydroxytetrahydrobiopterin dehydratase | - |
| A9F01_RS10010 (A9F01_10010) | secF | 2249616..2250533 (-) | 918 | WP_010947716.1 | protein translocase subunit SecF | - |
| A9F01_RS10015 (A9F01_10015) | secD | 2250546..2252402 (-) | 1857 | WP_010947717.1 | protein translocase subunit SecD | - |
| A9F01_RS10020 (A9F01_10020) | yajC | 2252424..2252759 (-) | 336 | WP_010947718.1 | preprotein translocase subunit YajC | - |
Sequence
Protein
Download Length: 104 a.a. Molecular weight: 12330.42 Da Isoelectric Point: 9.4609
>NTDB_id=183850 A9F01_RS09995 WP_010947713.1 2247482..2247796(-) (lpp1978) [Legionella pneumophila strain Philadelphia_3]
MSKHQGFTLMEVLVSLMLMTTVVLMLVEQQLKTRDIINHLIWRIQGSQYLDQVDEALYISENRLPLPPSNYHFDIRRSQK
KIILNVTWFKKSQSIIRSYDLDAH
MSKHQGFTLMEVLVSLMLMTTVVLMLVEQQLKTRDIINHLIWRIQGSQYLDQVDEALYISENRLPLPPSNYHFDIRRSQK
KIILNVTWFKKSQSIIRSYDLDAH
Nucleotide
Download Length: 315 bp
>NTDB_id=183850 A9F01_RS09995 WP_010947713.1 2247482..2247796(-) (lpp1978) [Legionella pneumophila strain Philadelphia_3]
ATGAGCAAGCATCAGGGTTTCACTCTAATGGAAGTACTTGTGTCATTAATGCTAATGACAACGGTAGTTCTGATGTTAGT
GGAACAACAGTTGAAAACCAGAGATATAATCAATCATCTTATTTGGCGAATTCAAGGTTCCCAATATCTAGATCAAGTAG
ATGAAGCATTATATATTAGTGAGAATAGACTCCCTCTGCCGCCTTCAAATTATCATTTTGATATCAGGAGATCTCAAAAG
AAAATCATTTTGAATGTTACGTGGTTTAAAAAAAGCCAGTCAATTATTCGCTCCTATGATCTGGATGCTCATTGA
ATGAGCAAGCATCAGGGTTTCACTCTAATGGAAGTACTTGTGTCATTAATGCTAATGACAACGGTAGTTCTGATGTTAGT
GGAACAACAGTTGAAAACCAGAGATATAATCAATCATCTTATTTGGCGAATTCAAGGTTCCCAATATCTAGATCAAGTAG
ATGAAGCATTATATATTAGTGAGAATAGACTCCCTCTGCCGCCTTCAAATTATCATTTTGATATCAGGAGATCTCAAAAG
AAAATCATTTTGAATGTTACGTGGTTTAAAAAAAGCCAGTCAATTATTCGCTCCTATGATCTGGATGCTCATTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| lpp1978 | Legionella pneumophila strain ERS1305867 |
96.154 |
100 |
0.962 |
| lpp1978 | Legionella pneumophila str. Paris |
94.231 |
100 |
0.942 |