Detailed information    

insolico Bioinformatically predicted

Overview


Name   pilZ   Type   Machinery gene
Locus tag   A9E99_RS07000 Genome accession   NZ_CP015928
Coordinates   1556343..1556684 (+) Length   113 a.a.
NCBI ID   WP_010947130.1    Uniprot ID   Q5ZVN9
Organism   Legionella pneumophila strain Philadelphia_1_CDC     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 1551343..1561684
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A9E99_RS06970 (A9E99_06965) fabG 1551343..1552086 (+) 744 WP_407716501.1 3-oxoacyl-ACP reductase FabG -
  A9E99_RS06975 (A9E99_06970) acpP 1552171..1552419 (+) 249 WP_003631752.1 acyl carrier protein -
  A9E99_RS06980 (A9E99_06975) fabF 1552439..1553677 (+) 1239 WP_010947126.1 beta-ketoacyl-ACP synthase II -
  A9E99_RS06985 (A9E99_06980) mltG 1553678..1554676 (+) 999 WP_010947127.1 endolytic transglycosylase MltG -
  A9E99_RS06990 (A9E99_06985) tmk 1554676..1555314 (+) 639 WP_010947128.1 dTMP kinase -
  A9E99_RS06995 (A9E99_06990) - 1555311..1556216 (+) 906 WP_010947129.1 DNA polymerase III subunit delta' -
  A9E99_RS07000 (A9E99_06995) pilZ 1556343..1556684 (+) 342 WP_010947130.1 PilZ domain-containing protein Machinery gene
  A9E99_RS07005 (A9E99_07000) - 1556740..1557528 (+) 789 WP_015444530.1 TatD family hydrolase -
  A9E99_RS07010 (A9E99_07005) - 1557640..1558740 (+) 1101 WP_010947132.1 anhydro-N-acetylmuramic acid kinase -
  A9E99_RS07015 (A9E99_07010) - 1558796..1560088 (+) 1293 WP_010947133.1 MFS transporter -
  A9E99_RS07020 (A9E99_07015) - 1560164..1561444 (-) 1281 WP_010947134.1 MFS transporter -

Sequence


Protein


Download         Length: 113 a.a.        Molecular weight: 12521.54 Da        Isoelectric Point: 8.2421

>NTDB_id=183752 A9E99_RS07000 WP_010947130.1 1556343..1556684(+) (pilZ) [Legionella pneumophila strain Philadelphia_1_CDC]
MTEKPQIINCSFPNEASLYMAYMPFVKGGGLFIRTQHVYSLGQSLELSVKLLNENEPYLVTGKIVWITPKGAQGNKPPGV
GIQFTGENSRYLCNKIETYLAGMLKSCQVTDTI

Nucleotide


Download         Length: 342 bp        

>NTDB_id=183752 A9E99_RS07000 WP_010947130.1 1556343..1556684(+) (pilZ) [Legionella pneumophila strain Philadelphia_1_CDC]
ATGACCGAAAAACCACAGATTATAAACTGCTCATTTCCCAATGAAGCATCTTTGTACATGGCTTACATGCCTTTTGTGAA
AGGTGGCGGTCTTTTTATAAGAACTCAACACGTTTATTCTCTAGGGCAGTCGCTTGAATTATCTGTTAAATTGCTCAATG
AAAATGAACCATATTTGGTCACTGGTAAAATAGTCTGGATTACTCCTAAAGGTGCACAAGGTAATAAGCCGCCGGGAGTT
GGTATTCAATTTACCGGTGAAAACAGTCGTTATCTATGTAACAAGATAGAAACTTATTTGGCAGGAATGCTAAAATCATG
TCAGGTTACAGATACTATATAG

Domains


Predicted by InterproScan.

(10-101)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB Q5ZVN9

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilZ Legionella pneumophila str. Paris

99.115

100

0.991

  pilZ Legionella pneumophila strain ERS1305867

99.115

100

0.991


Multiple sequence alignment