Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   BS21228_RS08735 Genome accession   NZ_CP020023
Coordinates   1604950..1605663 (-) Length   237 a.a.
NCBI ID   WP_014481000.1    Uniprot ID   -
Organism   Bacillus subtilis strain ATCC 21228     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1599950..1610663
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BS21228_RS08715 (BS21228_08670) ghrB 1600095..1601072 (+) 978 WP_072592561.1 D-glycerate dehydrogenase -
  BS21228_RS08720 (BS21228_08675) psdB 1601109..1603049 (-) 1941 WP_014480997.1 lantibiotic ABC transporter permease PsdB -
  BS21228_RS08725 (BS21228_08680) psdA 1603024..1603803 (-) 780 WP_014480998.1 lantibiotic ABC transporter ATP-binding protein PsdA -
  BS21228_RS08730 (BS21228_08685) psdS 1603886..1604956 (-) 1071 WP_014480999.1 two-component sensor histidine kinase PsdS -
  BS21228_RS08735 (BS21228_08690) braR 1604950..1605663 (-) 714 WP_014481000.1 two-component system response regulator PsdR Regulator
  BS21228_RS08740 (BS21228_08695) - 1605810..1606018 (+) 209 Protein_1733 hypothetical protein -
  BS21228_RS08745 (BS21228_08700) yvcN 1606054..1606818 (-) 765 WP_015251150.1 arylamine N-acetyltransferase -
  BS21228_RS08750 (BS21228_08705) crh 1606819..1607076 (-) 258 WP_003219835.1 HPr family phosphocarrier protein -
  BS21228_RS08755 (BS21228_08710) whiA 1607100..1608050 (-) 951 WP_003228147.1 DNA-binding protein WhiA -
  BS21228_RS08760 (BS21228_08715) mgfK 1608073..1609026 (-) 954 WP_003244450.1 gluconeogenesis morphogenetic factor -
  BS21228_RS08765 (BS21228_08720) rapZ 1609028..1609915 (-) 888 WP_003243903.1 RNase adapter RapZ -
  BS21228_RS08770 (BS21228_08725) rppI 1609940..1610416 (-) 477 WP_014481002.1 NUDIX domain-containing protein -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27541.46 Da        Isoelectric Point: 4.6774

>NTDB_id=183734 BS21228_RS08735 WP_014481000.1 1604950..1605663(-) (braR) [Bacillus subtilis strain ATCC 21228]
MYRILLVEDDERIASLLGGHLQKYGYEVKIAEQLNDIKLEFAEMKPDLVLLDINLPFFDGFYWCRQIRTISNAPIIFISA
RIDELNQVMAIENGGDDYITKPFHLEVVMAKIKSVLRRTYGEYSPSLPQESRIVELGGLTIYPDQNEAEWNSSRILFSQK
EFQLLSIFVREHKKIVSRDELLEALWDDVDFVDDNTLTVNVNRLRRKLENAGLKDCISTIRGQGYQFQVNRKDEAEC

Nucleotide


Download         Length: 714 bp        

>NTDB_id=183734 BS21228_RS08735 WP_014481000.1 1604950..1605663(-) (braR) [Bacillus subtilis strain ATCC 21228]
GTGTATCGGATTTTGCTTGTGGAAGATGATGAGCGGATTGCTTCTTTGCTGGGCGGTCATCTTCAAAAATACGGATATGA
AGTGAAAATTGCTGAACAGCTGAATGATATAAAATTGGAATTTGCAGAAATGAAGCCTGATCTTGTGCTGCTTGATATCA
ACCTGCCTTTTTTTGACGGATTTTATTGGTGCAGGCAAATCCGTACCATTTCCAATGCGCCGATTATCTTTATATCGGCA
CGGATCGATGAGCTGAATCAGGTAATGGCGATTGAAAATGGCGGCGATGATTATATCACAAAGCCGTTCCATCTAGAGGT
AGTGATGGCCAAAATCAAAAGCGTCCTGCGCCGCACATATGGTGAATATTCGCCCTCTTTGCCGCAGGAATCTAGAATAG
TGGAGCTTGGTGGGCTGACGATTTATCCTGATCAAAATGAGGCCGAATGGAACAGCTCCCGTATTCTGTTTTCCCAAAAA
GAATTTCAGCTTCTCTCTATTTTTGTGAGGGAGCATAAAAAAATTGTTTCTCGTGATGAACTATTGGAGGCGTTATGGGA
TGACGTTGATTTTGTCGATGACAATACGTTAACGGTCAATGTCAACCGGCTGCGGAGAAAACTGGAGAATGCCGGACTGA
AAGATTGCATTTCCACAATCAGAGGACAAGGCTATCAATTTCAAGTCAATCGGAAGGATGAAGCGGAGTGTTAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(155-227)

Response regulator receiver domain (Response_reg)

(4-112)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

45.982

94.515

0.435