Detailed information
Bioinformatically predicted
Overview
| Name | lpp1978 | Type | Machinery gene |
| Locus tag | A9E98_RS09750 | Genome accession | NZ_CP015926 |
| Coordinates | 2191708..2192022 (-) | Length | 104 a.a. |
| NCBI ID | WP_010947713.1 | Uniprot ID | Q5ZU11 |
| Organism | Legionella pneumophila strain E11_U | ||
| Function | DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 2186708..2197022
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A9E98_RS09725 (A9E98_09725) | - | 2187137..2187637 (-) | 501 | WP_015444348.1 | hypothetical protein | - |
| A9E98_RS09730 (A9E98_09730) | - | 2188129..2188989 (+) | 861 | WP_015444347.1 | polysaccharide deacetylase family protein | - |
| A9E98_RS09735 (A9E98_09735) | - | 2189106..2190299 (-) | 1194 | WP_010947710.1 | murein transglycosylase A | - |
| A9E98_RS09740 (A9E98_09740) | lpp1976 | 2190409..2190966 (-) | 558 | WP_010947711.1 | hypothetical protein | Machinery gene |
| A9E98_RS09745 (A9E98_09745) | lpp1977 | 2190963..2191769 (-) | 807 | WP_010947712.1 | PilW family protein | Machinery gene |
| A9E98_RS09750 (A9E98_09750) | lpp1978 | 2191708..2192022 (-) | 315 | WP_010947713.1 | type IV pilus modification PilV family protein | Machinery gene |
| A9E98_RS09755 (A9E98_09755) | hisC | 2192182..2193291 (+) | 1110 | WP_015444344.1 | histidinol-phosphate transaminase | - |
| A9E98_RS09760 (A9E98_09760) | - | 2193328..2193669 (+) | 342 | WP_010947715.1 | 4a-hydroxytetrahydrobiopterin dehydratase | - |
| A9E98_RS09765 (A9E98_09765) | secF | 2193842..2194759 (-) | 918 | WP_010947716.1 | protein translocase subunit SecF | - |
| A9E98_RS09770 (A9E98_09770) | secD | 2194772..2196628 (-) | 1857 | WP_010947717.1 | protein translocase subunit SecD | - |
| A9E98_RS09775 (A9E98_09775) | yajC | 2196650..2196985 (-) | 336 | WP_010947718.1 | preprotein translocase subunit YajC | - |
Sequence
Protein
Download Length: 104 a.a. Molecular weight: 12330.42 Da Isoelectric Point: 9.4609
>NTDB_id=183682 A9E98_RS09750 WP_010947713.1 2191708..2192022(-) (lpp1978) [Legionella pneumophila strain E11_U]
MSKHQGFTLMEVLVSLMLMTTVVLMLVEQQLKTRDIINHLIWRIQGSQYLDQVDEALYISENRLPLPPSNYHFDIRRSQK
KIILNVTWFKKSQSIIRSYDLDAH
MSKHQGFTLMEVLVSLMLMTTVVLMLVEQQLKTRDIINHLIWRIQGSQYLDQVDEALYISENRLPLPPSNYHFDIRRSQK
KIILNVTWFKKSQSIIRSYDLDAH
Nucleotide
Download Length: 315 bp
>NTDB_id=183682 A9E98_RS09750 WP_010947713.1 2191708..2192022(-) (lpp1978) [Legionella pneumophila strain E11_U]
ATGAGCAAGCATCAGGGTTTCACTCTAATGGAAGTACTTGTGTCATTAATGCTAATGACAACGGTAGTTCTGATGTTAGT
GGAACAACAGTTGAAAACCAGAGATATAATCAATCATCTTATTTGGCGAATTCAAGGTTCCCAATATCTAGATCAAGTAG
ATGAAGCATTATATATTAGTGAGAATAGACTCCCTCTGCCGCCTTCAAATTATCATTTTGATATCAGGAGATCTCAAAAG
AAAATCATTTTGAATGTTACGTGGTTTAAAAAAAGCCAGTCAATTATTCGCTCCTATGATCTGGATGCTCATTGA
ATGAGCAAGCATCAGGGTTTCACTCTAATGGAAGTACTTGTGTCATTAATGCTAATGACAACGGTAGTTCTGATGTTAGT
GGAACAACAGTTGAAAACCAGAGATATAATCAATCATCTTATTTGGCGAATTCAAGGTTCCCAATATCTAGATCAAGTAG
ATGAAGCATTATATATTAGTGAGAATAGACTCCCTCTGCCGCCTTCAAATTATCATTTTGATATCAGGAGATCTCAAAAG
AAAATCATTTTGAATGTTACGTGGTTTAAAAAAAGCCAGTCAATTATTCGCTCCTATGATCTGGATGCTCATTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| lpp1978 | Legionella pneumophila strain ERS1305867 |
96.154 |
100 |
0.962 |
| lpp1978 | Legionella pneumophila str. Paris |
94.231 |
100 |
0.942 |