Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   B4602_RS06770 Genome accession   NZ_CP020020
Coordinates   1326468..1327091 (-) Length   207 a.a.
NCBI ID   WP_001208755.1    Uniprot ID   P65819
Organism   Staphylococcus aureus strain ATCC 6538     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1321468..1332091
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  B4602_RS06745 rpmG 1323044..1323193 (+) 150 WP_001265708.1 50S ribosomal protein L33 -
  B4602_RS06750 rpsN 1323647..1323916 (+) 270 WP_001085655.1 30S ribosomal protein S14 -
  B4602_RS06755 guaC 1324073..1325050 (+) 978 WP_042727642.1 GMP reductase -
  B4602_RS06765 - 1325072..1326088 (+) 1017 WP_170957313.1 CAP domain-containing protein -
  B4602_RS06770 dinR/lexA 1326468..1327091 (-) 624 WP_001208755.1 transcriptional repressor LexA Regulator
  B4602_RS06775 sosA 1327234..1327467 (+) 234 WP_000499647.1 DNA damage-induced cell division inhibitor SosA -
  B4602_RS06780 - 1327603..1327842 (+) 240 WP_000071351.1 DUF896 domain-containing protein -
  B4602_RS06785 recP/tkt 1327963..1329951 (+) 1989 WP_042727641.1 transketolase Machinery gene
  B4602_RS06790 - 1330229..1330471 (+) 243 WP_000246909.1 YneF family protein -
  B4602_RS06795 - 1330458..1330556 (+) 99 WP_001789897.1 hypothetical protein -
  B4602_RS06800 - 1330650..1331117 (+) 468 WP_000966142.1 CcdC family protein -

Sequence

Protein


Download         Length: 207 a.a.        Molecular weight: 23331.55 Da        Isoelectric Point: 4.8811

>NTDB_id=183633 B4602_RS06770 WP_001208755.1 1326468..1327091(-) (dinR/lexA) [Staphylococcus aureus strain ATCC 6538]
MRELTKRQSEIYNYIKQVVQMKGYPPSVREIGEAVGLASSSTVHGHLSRLEEKGYIRRDPTKPRAIEIVSDQTNDNINME
ETIHVPVIGKVTAGVPITAVENIEEYFPLPEHLTSTHNSDIFILNVVGDSMIEAGILDGDKVIVRSQTIAENGDIIVAMT
EEDEATVKRFYKEKNRYRLQPENSTMEPIYLDNVAVIGKVIGLYREM

Nucleotide


Download         Length: 624 bp        

>NTDB_id=183633 B4602_RS06770 WP_001208755.1 1326468..1327091(-) (dinR/lexA) [Staphylococcus aureus strain ATCC 6538]
ATGAGAGAATTAACAAAACGACAAAGCGAAATATATAACTATATTAAACAAGTTGTTCAAATGAAAGGTTATCCGCCTAG
TGTTCGCGAAATTGGTGAAGCAGTTGGCTTAGCATCCAGTTCAACTGTTCATGGTCACCTTTCACGTCTTGAAGAAAAAG
GCTATATAAGAAGAGATCCGACGAAACCACGTGCTATAGAAATTGTAAGTGATCAAACAAATGATAATATTAATATGGAA
GAAACGATTCATGTGCCAGTTATTGGTAAAGTCACAGCAGGTGTTCCTATTACCGCAGTAGAAAATATTGAAGAATATTT
TCCATTACCTGAACACTTAACATCGACACACAATAGCGACATATTCATATTAAACGTCGTAGGCGACAGTATGATTGAGG
CTGGTATATTAGACGGAGACAAAGTAATTGTTCGCAGTCAAACCATAGCAGAAAATGGAGACATTATTGTTGCTATGACT
GAGGAAGATGAAGCAACTGTCAAACGCTTCTATAAAGAAAAAAATCGTTATCGATTACAACCTGAAAATAGTACAATGGA
GCCAATTTACCTCGACAATGTTGCTGTAATTGGGAAAGTAATTGGTTTGTACCGCGAAATGTAA

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(1-65)

Peptidase S24-like (Peptidase_S24)

(86-201)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB P65819

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

66.341

99.034

0.657