Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   B4602_RS03345 Genome accession   NZ_CP020020
Coordinates   679697..680371 (+) Length   224 a.a.
NCBI ID   WP_001166505.1    Uniprot ID   Q2FIY0
Organism   Staphylococcus aureus strain ATCC 6538     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 674697..685371
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  B4602_RS03315 - 674912..675979 (+) 1068 WP_000980137.1 membrane protein -
  B4602_RS03320 - 676130..677173 (+) 1044 WP_001030771.1 alpha/beta hydrolase -
  B4602_RS03330 - 677502..677930 (+) 429 WP_000198504.1 hypothetical protein -
  B4602_RS03335 - 678139..678645 (-) 507 WP_000940129.1 GNAT family N-acetyltransferase -
  B4602_RS03340 graX 678758..679681 (+) 924 WP_000802955.1 auxiliary protein GraX/ApsX -
  B4602_RS03345 braR 679697..680371 (+) 675 WP_001166505.1 response regulator transcription factor GraR/ApsR Regulator
  B4602_RS03350 graS 680364..681404 (+) 1041 WP_001061262.1 histidine kinase GraS/ApsS -
  B4602_RS03355 vraF 681548..682309 (+) 762 WP_000985996.1 ABC transporter ATP-binding protein VraF -
  B4602_RS03360 vraG 682299..684188 (+) 1890 WP_042727563.1 ABC transporter permease VraG -

Sequence

Protein


Download         Length: 224 a.a.        Molecular weight: 26078.92 Da        Isoelectric Point: 4.3968

>NTDB_id=183603 B4602_RS03345 WP_001166505.1 679697..680371(+) (braR) [Staphylococcus aureus strain ATCC 6538]
MQILLVEDDNTLFQELKKELEQWDFNVAGIEDFGKVMDTFESFNPEIVILDVQLPKYDGFYWCRKMREVSNVPILFLSSR
DNPMDQVMSMELGADDYMQKPFYTNVLIAKLQAIYRRVYEFTAEEKRTLTWQDAVVDLSKDSIQKGDQTIFLSKTEMIIL
EILITKKNQIVSRDTIITALWDDEAFVSDNTLTVNVNRLRKKLSEISMDSAIETKVGKGYMAHE

Nucleotide


Download         Length: 675 bp        

>NTDB_id=183603 B4602_RS03345 WP_001166505.1 679697..680371(+) (braR) [Staphylococcus aureus strain ATCC 6538]
ATGCAAATACTACTAGTAGAAGATGACAATACTTTGTTTCAAGAATTGAAAAAAGAATTAGAACAATGGGATTTTAATGT
TGCTGGTATTGAAGATTTCGGCAAAGTAATGGATACATTTGAAAGTTTTAATCCTGAAATTGTTATATTGGATGTTCAAT
TACCTAAATATGATGGGTTTTATTGGTGCAGAAAAATGAGAGAAGTTTCCAACGTACCAATATTATTTTTATCATCTCGT
GATAATCCAATGGATCAAGTGATGAGTATGGAACTTGGCGCAGATGATTATATGCAAAAACCGTTCTATACCAATGTATT
AATTGCTAAATTACAAGCGATTTATCGTCGTGTCTATGAGTTTACAGCTGAAGAAAAACGTACATTGACTTGGCAAGATG
CTGTCGTTGATCTATCAAAAGATAGTATACAAAAAGGTGATCAGACGATTTTCCTGTCCAAAACAGAAATGATTATATTA
GAAATTCTTATTACCAAAAAAAATCAAATCGTTTCGAGAGATACAATTATCACTGCATTATGGGATGATGAAGCATTTGT
TAGTGATAATACGTTAACAGTAAATGTGAATCGTTTACGAAAAAAATTATCTGAAATTAGTATGGATAGTGCAATCGAAA
CAAAAGTAGGAAAAGGATATATGGCTCATGAATAA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(3-111)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(148-221)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q2FIY0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

40.909

98.214

0.402