Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   B4603_RS06845 Genome accession   NZ_CP020019
Coordinates   1356061..1356684 (-) Length   207 a.a.
NCBI ID   WP_001208755.1    Uniprot ID   P65819
Organism   Staphylococcus aureus strain 08S00974     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1351061..1361684
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  B4603_RS06820 rpmG 1352638..1352787 (+) 150 WP_001265708.1 50S ribosomal protein L33 -
  B4603_RS06825 rpsN 1353241..1353510 (+) 270 WP_001085655.1 30S ribosomal protein S14 -
  B4603_RS06830 guaC 1353667..1354644 (+) 978 WP_000688126.1 GMP reductase -
  B4603_RS06840 - 1354666..1355682 (+) 1017 WP_169428106.1 CAP domain-containing protein -
  B4603_RS06845 dinR/lexA 1356061..1356684 (-) 624 WP_001208755.1 transcriptional repressor LexA Regulator
  B4603_RS06850 sosA 1356827..1357060 (+) 234 WP_000499646.1 DNA damage-induced cell division inhibitor SosA -
  B4603_RS06855 - 1357196..1357435 (+) 240 WP_000071351.1 DUF896 domain-containing protein -
  B4603_RS06860 recP/tkt 1357556..1359544 (+) 1989 WP_000481439.1 transketolase Machinery gene
  B4603_RS06865 - 1359822..1360064 (+) 243 WP_000246909.1 YneF family protein -
  B4603_RS06870 - 1360051..1360149 (+) 99 WP_001789897.1 hypothetical protein -
  B4603_RS06875 - 1360243..1360710 (+) 468 WP_000966144.1 CcdC family protein -

Sequence

Protein


Download         Length: 207 a.a.        Molecular weight: 23331.55 Da        Isoelectric Point: 4.8811

>NTDB_id=183547 B4603_RS06845 WP_001208755.1 1356061..1356684(-) (dinR/lexA) [Staphylococcus aureus strain 08S00974]
MRELTKRQSEIYNYIKQVVQMKGYPPSVREIGEAVGLASSSTVHGHLSRLEEKGYIRRDPTKPRAIEIVSDQTNDNINME
ETIHVPVIGKVTAGVPITAVENIEEYFPLPEHLTSTHNSDIFILNVVGDSMIEAGILDGDKVIVRSQTIAENGDIIVAMT
EEDEATVKRFYKEKNRYRLQPENSTMEPIYLDNVAVIGKVIGLYREM

Nucleotide


Download         Length: 624 bp        

>NTDB_id=183547 B4603_RS06845 WP_001208755.1 1356061..1356684(-) (dinR/lexA) [Staphylococcus aureus strain 08S00974]
ATGAGAGAATTAACAAAACGACAAAGCGAAATATATAACTATATTAAACAAGTTGTTCAAATGAAAGGTTATCCGCCTAG
TGTTCGCGAAATTGGTGAAGCAGTTGGCTTAGCATCCAGTTCAACTGTTCATGGTCACCTTTCACGTCTTGAAGAAAAAG
GCTATATAAGAAGAGATCCAACGAAACCACGTGCTATAGAAATTGTAAGTGATCAAACAAATGATAATATTAATATGGAA
GAAACGATTCATGTGCCAGTTATTGGTAAAGTCACAGCAGGTGTTCCTATTACCGCAGTAGAAAATATTGAAGAATATTT
TCCATTACCTGAACACTTAACATCGACACACAATAGCGACATATTCATATTAAACGTCGTAGGCGACAGTATGATTGAGG
CTGGTATATTAGACGGAGACAAAGTAATTGTTCGCAGTCAAACCATAGCAGAAAATGGAGACATTATTGTTGCTATGACT
GAGGAAGATGAGGCAACTGTCAAACGCTTCTATAAAGAAAAAAATCGTTATCGATTACAACCTGAAAATAGTACAATGGA
GCCAATTTACCTCGACAATGTTGCTGTAATTGGGAAAGTAATTGGTTTGTATCGCGAAATGTAA

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(1-65)

Peptidase S24-like (Peptidase_S24)

(86-201)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB P65819

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

66.341

99.034

0.657