Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   B4603_RS03565 Genome accession   NZ_CP020019
Coordinates   721379..722053 (+) Length   224 a.a.
NCBI ID   WP_001166506.1    Uniprot ID   -
Organism   Staphylococcus aureus strain 08S00974     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 716379..727053
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  B4603_RS03535 - 716594..717661 (+) 1068 WP_000980142.1 membrane protein -
  B4603_RS03540 - 717812..718855 (+) 1044 WP_001030759.1 alpha/beta hydrolase -
  B4603_RS03550 - 719185..719613 (+) 429 WP_000198503.1 hypothetical protein -
  B4603_RS03555 - 719821..720327 (-) 507 WP_000940128.1 GNAT family N-acetyltransferase -
  B4603_RS03560 graX 720440..721363 (+) 924 WP_000802948.1 auxiliary protein GraX/ApsX -
  B4603_RS03565 braR 721379..722053 (+) 675 WP_001166506.1 response regulator transcription factor GraR/ApsR Regulator
  B4603_RS03570 graS 722046..723086 (+) 1041 WP_001061267.1 histidine kinase GraS/ApsS -
  B4603_RS03575 vraF 723233..723994 (+) 762 WP_000153733.1 ABC transporter ATP-binding protein VraF -
  B4603_RS03580 - 723984..725873 (+) 1890 WP_000009400.1 FtsX-like permease family protein -

Sequence

Protein


Download         Length: 224 a.a.        Molecular weight: 26062.92 Da        Isoelectric Point: 4.4019

>NTDB_id=183517 B4603_RS03565 WP_001166506.1 721379..722053(+) (braR) [Staphylococcus aureus strain 08S00974]
MQILLVEDDNTLFQELKKELEQWDFNVAGIEDFGKVMDTFESFNPEIVILDVQLPKYDGFYWCRKMREVSNVPILFLSSR
DNPMDQVMSMELGADDYMQKPFYTNVLIAKLQAIYRRVYEFTAEEKRTLTWQDAVVDLSKDSIQKGEQTIFLSKTEMIIL
EILITKKNQIVSRDTIITALWDDEAFVSDNTLTVNVNRLRKKLSEIGMDSAIETKVGKGYMAHE

Nucleotide


Download         Length: 675 bp        

>NTDB_id=183517 B4603_RS03565 WP_001166506.1 721379..722053(+) (braR) [Staphylococcus aureus strain 08S00974]
ATGCAAATACTACTAGTAGAAGATGACAATACTTTGTTTCAAGAATTGAAAAAAGAATTAGAACAATGGGATTTTAATGT
TGCTGGTATTGAAGATTTCGGCAAAGTAATGGATACATTTGAAAGTTTTAATCCTGAAATTGTTATATTGGATGTTCAAT
TACCTAAATATGATGGGTTTTATTGGTGCAGAAAAATGAGAGAAGTTTCCAACGTACCAATATTATTTTTATCATCTCGT
GATAATCCAATGGATCAAGTGATGAGTATGGAACTTGGCGCAGATGATTATATGCAAAAGCCTTTTTATACAAATGTATT
AATTGCTAAATTACAAGCGATTTATCGACGAGTGTATGAATTTACTGCTGAAGAAAAACGTACATTGACTTGGCAAGATG
CTGTCGTTGATCTATCAAAAGATAGTATACAAAAAGGTGAACAGACGATTTTTCTATCCAAAACAGAAATGATTATATTA
GAAATTCTTATTACTAAAAAAAATCAAATCGTTTCGAGAGATACAATTATTACTGCGCTATGGGATGATGAAGCATTTGT
CAGTGATAACACATTAACAGTTAATGTGAACCGATTACGTAAGAAACTATCTGAAATAGGGATGGACAGCGCAATTGAAA
CAAAAGTAGGAAAAGGATATATGGCACATGAATAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(148-221)

Response regulator receiver domain (Response_reg)

(3-111)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

41.818

98.214

0.411

Multiple sequence alignment