Detailed information NTG0183500

Bioinformatically predicted

Overview

• Name: sbcB
• Type: Machinery gene
• Locus tag: BVZ63_RS07425
• Genome accession: NZ_CP020014
• Coordinates: 1531037..1532458 (+)
• Length: 473 a.a.
• NCBI ID: WP_011272626.1
• Uniprot ID: -
• Organism: Haemophilus influenzae strain 11P6H
• Function: promote homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1526037..1537458

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BVZ63_RS07415 (BVZ63_1509)	-	1529238..1530146 (+)	909	WP_005687201.1	DUF5655 domain-containing protein	-
BVZ63_RS07420 (BVZ63_1510)	-	1530149..1531024 (+)	876	WP_011961929.1	hypothetical protein	-
BVZ63_RS07425 (BVZ63_1511)	sbcB	1531037..1532458 (+)	1422	WP_011272626.1	exodeoxyribonuclease I	Machinery gene
BVZ63_RS07430 (BVZ63_1512)	phoR	1533147..1534424 (-)	1278	WP_011961930.1	phosphate regulon sensor histidine kinase PhoR	-
BVZ63_RS07435 (BVZ63_1513)	phoB	1534421..1535116 (-)	696	WP_006996031.1	phosphate regulon transcriptional regulator PhoB	-
BVZ63_RS07440 (BVZ63_1514)	pstB	1535213..1535980 (-)	768	WP_005650603.1	phosphate ABC transporter ATP-binding protein PstB	-
BVZ63_RS07445 (BVZ63_1515)	pstA	1535990..1536838 (-)	849	WP_005650601.1	phosphate ABC transporter permease PstA	-

Sequence

Protein

• Length: 473 a.a.
• Molecular weight: 54309.60 Da
• Isoelectric Point: 5.4095

>NTDB_id=183500 BVZ63_RS07425 WP_011272626.1 1531037..1532458(+) (sbcB) [Haemophilus influenzae strain 11P6H]
MAKDFSFFIYDYESFGVNPATDRPAQFAGIRTDADFNIIGKPIMFYCKQTNDYLPAPEAVMVTGITPQECNEKGLSEPEF
AANILAEFSQPNTCVMGYNNIRYDDEMTRYTFYRNFIDPYEYSWKNGNSRWDLLDLVRACYALRPEGINWAYDDDGMPSF
RLEKLTKANGIEHENAHDAMADVYATIAMAKLIKEKQPKLFQYFFENRGKKEIEKLVDTGAMTPLVHVSGMLGNYRGNCT
WVAPLSWHPTNQNALIVCDLTGDIDNLLAKSADELRTDLYTKKSELEERGVSSVPLKLVHINKCPILAPAKTLLPETANR
LGIDRQLCLDNLAKLRASFDIREKVADIFNEERQFASNDNVETELYNGFFSNADKNNMAILRSLPAEKLSEHGLAFEDKR
ILELLFHYRARHFYKTLTRAEQIKWQKYRQNKLEKSAVEFQSGLQRLAEEHSDNSEKLSLLQQVYEYGIKLLG

Nucleotide

• Length: 1422 bp

>NTDB_id=183500 BVZ63_RS07425 WP_011272626.1 1531037..1532458(+) (sbcB) [Haemophilus influenzae strain 11P6H]
ATGGCAAAAGATTTCAGCTTTTTTATTTACGATTATGAAAGTTTTGGTGTAAATCCAGCAACAGATCGTCCTGCGCAATT
TGCGGGTATTCGTACAGATGCTGATTTTAATATCATTGGTAAACCAATAATGTTTTATTGTAAACAAACCAACGATTATT
TACCGGCTCCTGAAGCGGTAATGGTAACAGGAATTACACCACAAGAATGTAATGAAAAGGGGCTTTCAGAGCCTGAATTC
GCCGCAAATATCTTAGCAGAATTTTCCCAACCCAATACTTGTGTCATGGGTTATAACAATATTCGCTATGATGATGAAAT
GACGCGTTATACGTTTTATCGTAATTTCATTGATCCTTATGAATACAGCTGGAAAAATGGGAATTCACGCTGGGATTTGT
TAGATTTAGTACGAGCTTGTTATGCCCTGCGTCCAGAAGGAATTAATTGGGCTTATGACGATGATGGAATGCCAAGTTTC
CGCTTAGAAAAACTCACTAAAGCAAATGGTATTGAGCATGAAAATGCTCACGATGCCATGGCGGATGTATATGCAACTAT
TGCTATGGCGAAATTAATTAAAGAAAAACAACCTAAATTATTCCAATATTTCTTTGAAAATCGCGGTAAAAAAGAAATCG
AAAAATTAGTTGATACAGGAGCGATGACACCTTTAGTGCATGTTTCTGGAATGCTAGGGAATTATCGTGGAAATTGCACT
TGGGTTGCACCTTTATCTTGGCATCCGACAAATCAAAATGCATTAATTGTGTGTGATTTAACTGGCGATATCGATAATTT
ATTAGCCAAAAGTGCGGATGAATTACGGACAGATTTATATACCAAAAAATCTGAATTAGAAGAAAGAGGAGTTTCATCCG
TTCCGTTAAAACTTGTGCATATTAATAAATGTCCTATTTTAGCACCAGCTAAAACTTTGTTACCAGAAACAGCAAATCGA
TTGGGTATTGATCGACAATTATGCTTGGATAATCTTGCAAAATTACGAGCATCTTTTGATATTCGTGAAAAAGTGGCGGA
TATTTTTAATGAAGAACGTCAATTTGCATCGAATGATAATGTAGAAACTGAGTTATACAATGGCTTTTTTAGCAATGCTG
ATAAAAATAATATGGCTATTTTACGTAGTTTACCTGCAGAAAAATTATCTGAACATGGTTTAGCTTTTGAAGATAAACGT
ATCCTTGAATTATTGTTCCATTATCGTGCTCGCCACTTTTATAAAACCCTCACACGCGCTGAACAAATTAAATGGCAAAA
ATACCGACAGAATAAACTTGAAAAAAGTGCGGTAGAGTTTCAATCAGGTTTACAACGTTTAGCCGAGGAACATTCAGATA
ATTCTGAAAAACTATCTTTGCTACAACAAGTATATGAATATGGTATAAAATTACTAGGTTAG

Domains

Predicted by InterProScan.

• Exonuclease (RNase_T) (9-188)

• Exonuclease C-terminal (ExoI_SH3) (208-468)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
sbcB	Vibrio cholerae O1 biovar El Tor strain E7946	54.936	98.52	0.541