Detailed information NTG0183454

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: A8142_RS01835
• Genome accession: NZ_CP015911
• Coordinates: 373943..375091 (+)
• Length: 382 a.a.
• NCBI ID: WP_007410270.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain LS69
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 368943..380091

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
A8142_RS01815 (A8142_01815)	-	369346..370029 (-)	684	WP_032872874.1	ABC transporter ATP-binding protein	-
A8142_RS01820 (A8142_01820)	-	370044..371474 (-)	1431	WP_032872876.1	ABC transporter permease	-
A8142_RS01825 (A8142_01825)	-	371687..372370 (+)	684	WP_032872879.1	response regulator transcription factor	-
A8142_RS01830 (A8142_01830)	-	372357..373790 (+)	1434	WP_161503657.1	sensor histidine kinase	-
A8142_RS01835 (A8142_01835)	rapC	373943..375091 (+)	1149	WP_007410270.1	Rap family tetratricopeptide repeat protein	Regulator
A8142_RS01840 (A8142_01840)	phrC	375075..375194 (+)	120	WP_003156334.1	PhrC/PhrF family phosphatase-inhibitory pheromone	Regulator
A8142_RS01845 (A8142_01845)	-	375345..375455 (-)	111	WP_369878517.1	YjcZ family sporulation protein	-
A8142_RS01850 (A8142_01850)	-	375535..376899 (-)	1365	WP_007609394.1	aspartate kinase	-
A8142_RS01855 (A8142_01855)	ceuB	377313..378266 (+)	954	WP_032872883.1	ABC transporter permease	Machinery gene
A8142_RS01860 (A8142_01860)	-	378256..379203 (+)	948	WP_014416905.1	iron chelate uptake ABC transporter family permease subunit	-
A8142_RS01865 (A8142_01865)	-	379197..379955 (+)	759	WP_007609404.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45475.70 Da
• Isoelectric Point: 4.9916

>NTDB_id=183454 A8142_RS01835 WP_007410270.1 373943..375091(+) (rapC) [Bacillus velezensis strain LS69]
MKSGLIPSSAVGQKINEWYRYIRTFSVPDAEILKAEIKQELDHMEPDSNLVLYYSLMEFRHQLMLDYLEPLEKLKIEDQP
TLSEILDNIDNSQAGLKGLLDYYVNFFKGMFEFDKREFISAITYYKQAEKKLAFVSDHVERAEFYFKVAEAYYHMKQTYF
SLIHIKNAYEIYVEQDTYNVRIIQCHFVFGVNLMDERRFEQAAKHFQHALQMAEKEQKAQLVGRALYNLGLCYYNQDRIG
EAIPYFERAVDTFESQRIVNSLPQAYFLITLIYFKLGKKEKASEYHKRGYEYAKETDDPVYTVKFEWLQALYQAKPDEET
ISACFRYLEDKNLYADIEDLALEAAKYYYEQNCFKISSDYFLKVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=183454 A8142_RS01835 WP_007410270.1 373943..375091(+) (rapC) [Bacillus velezensis strain LS69]
ATGAAGAGCGGGTTAATTCCTTCTTCAGCAGTCGGGCAGAAAATTAACGAGTGGTACCGATACATCAGAACATTCAGCGT
GCCGGATGCGGAGATCTTGAAGGCCGAGATCAAACAAGAGCTTGACCATATGGAGCCTGATTCGAACTTAGTGCTTTATT
ATTCCCTCATGGAATTTCGCCATCAGCTGATGCTGGACTACTTGGAGCCGCTGGAAAAACTGAAGATAGAAGACCAGCCG
ACCCTGTCGGAAATTCTTGATAACATTGATAACAGCCAGGCCGGCCTCAAGGGGCTTCTCGATTATTACGTCAATTTTTT
CAAAGGCATGTTTGAATTTGATAAAAGAGAATTTATCTCAGCGATTACATATTATAAACAAGCTGAGAAAAAACTGGCCT
TCGTATCGGACCATGTGGAACGGGCGGAGTTTTATTTTAAAGTGGCCGAAGCTTATTATCATATGAAACAAACGTATTTT
TCTTTGATACATATAAAAAACGCTTATGAAATTTACGTGGAGCAGGACACATATAACGTCCGGATTATTCAATGCCATTT
TGTATTCGGCGTCAATTTAATGGATGAAAGGCGCTTTGAACAGGCGGCCAAACATTTTCAGCACGCTCTGCAAATGGCCG
AAAAAGAACAAAAAGCGCAGCTTGTCGGGAGGGCGCTGTATAACCTCGGACTGTGCTACTACAATCAGGACCGCATCGGC
GAAGCGATTCCGTACTTTGAACGGGCGGTTGATACATTTGAATCACAAAGAATCGTCAATTCTCTTCCTCAAGCATATTT
TCTAATCACACTCATTTACTTTAAACTCGGAAAAAAAGAAAAAGCGTCGGAATATCACAAGCGGGGATATGAATATGCTA
AAGAAACAGACGATCCCGTTTACACGGTAAAATTCGAATGGCTGCAGGCTCTGTATCAGGCGAAACCGGATGAGGAAACA
ATCAGCGCGTGTTTCCGTTACCTGGAAGATAAAAATTTATACGCCGATATAGAGGATTTAGCACTAGAAGCAGCTAAATA
TTACTATGAACAAAATTGCTTTAAGATTTCTTCTGACTATTTTCTGAAAGTCGAAGAGGCAAGGAAACAAATACAAAGGA
GTGAGGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	82.461	100	0.825
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568