Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   LLUL8_RS11700 Genome accession   NZ_CP015908
Coordinates   2275130..2276158 (-) Length   342 a.a.
NCBI ID   WP_058221367.1    Uniprot ID   -
Organism   Lactococcus lactis subsp. lactis strain UL8     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 2270130..2281158
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LLUL8_RS11675 (LLUL8_2275) - 2270417..2270914 (-) 498 WP_003132662.1 nitroreductase family protein -
  LLUL8_RS11680 (LLUL8_2276) - 2270901..2271110 (-) 210 WP_003132661.1 hypothetical protein -
  LLUL8_RS11685 (LLUL8_2277) - 2271107..2271934 (-) 828 WP_058221368.1 radical SAM protein -
  LLUL8_RS13215 (LLUL8_2278) - 2271927..2273126 (-) 1200 WP_228763251.1 hypothetical protein -
  LLUL8_RS13220 (LLUL8_2279) - 2273123..2274049 (-) 927 WP_228763250.1 radical SAM protein -
  LLUL8_RS11695 (LLUL8_2280) - 2274152..2275009 (-) 858 WP_003132658.1 Rgg/GadR/MutR family transcriptional regulator -
  LLUL8_RS11700 (LLUL8_2281) sepM 2275130..2276158 (-) 1029 WP_058221367.1 SepM family pheromone-processing serine protease Regulator
  LLUL8_RS11705 (LLUL8_2282) coaD 2276145..2276642 (-) 498 WP_058221366.1 pantetheine-phosphate adenylyltransferase -
  LLUL8_RS11710 (LLUL8_2283) rsmD 2276690..2277229 (-) 540 WP_003132655.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  LLUL8_RS11715 (LLUL8_2284) - 2277400..2278620 (-) 1221 WP_003132654.1 MFS transporter -
  LLUL8_RS11720 (LLUL8_2285) lmrP 2278704..2279929 (-) 1226 Protein_2266 multidrug efflux MFS transporter LmrP -
  LLUL8_RS11725 (LLUL8_2286) - 2280117..2280611 (+) 495 WP_012898649.1 RNA polymerase sigma factor -

Sequence


Protein


Download         Length: 342 a.a.        Molecular weight: 37379.98 Da        Isoelectric Point: 9.9183

>NTDB_id=183390 LLUL8_RS11700 WP_058221367.1 2275130..2276158(-) (sepM) [Lactococcus lactis subsp. lactis strain UL8]
MKKNKKINPKLKWGISIGLIVVALLALFYPTSYYVEMPGTTEPLGKMVKVEGKKDEHKGDFFLTTVQIARANLATMIYSH
FNSFTSIYSEQEMTGGLNDAQFNRVNQFYMETAQNTAIYQAFKLANKPYELKYEGVYVLDIAKNSTFKNKLELADTITAV
NGQQFTSSADMIAYVSKQKVGDSVTIEYTRIDGTKHKSTGKYIKIANGKTGIGISLVDHTEVVTTPKVTVNAGSISGPSA
GMMFTLEIYSQLTGKDLRNGREIAGTGTIEHDGSIGQIGGVDKKVATASKEGAKVFLVPDSGTKKESSNNYLGAKAAAKK
LKTKMKIVPVKTIQDALDYLEK

Nucleotide


Download         Length: 1029 bp        

>NTDB_id=183390 LLUL8_RS11700 WP_058221367.1 2275130..2276158(-) (sepM) [Lactococcus lactis subsp. lactis strain UL8]
ATGAAAAAAAATAAAAAAATTAATCCCAAATTAAAATGGGGAATCTCGATTGGTCTAATTGTTGTTGCCCTTTTAGCTTT
ATTTTATCCAACAAGTTACTATGTGGAAATGCCCGGAACAACCGAGCCTTTAGGAAAAATGGTCAAAGTTGAAGGCAAAA
AAGATGAACATAAAGGTGATTTTTTCCTGACGACTGTCCAAATTGCACGAGCAAATCTTGCTACAATGATTTACAGCCAT
TTTAATAGTTTTACAAGCATTTACAGTGAGCAAGAAATGACTGGTGGACTTAACGACGCACAGTTCAACCGTGTCAACCA
GTTTTACATGGAAACGGCACAGAATACAGCGATTTATCAAGCTTTTAAATTAGCTAATAAACCTTATGAACTTAAATATG
AAGGCGTTTATGTCCTTGATATTGCCAAAAATTCGACCTTTAAAAATAAGCTAGAACTTGCAGATACGATTACAGCAGTC
AATGGTCAACAGTTTACATCAAGTGCCGACATGATTGCTTATGTTTCCAAACAAAAAGTCGGTGATTCAGTAACGATTGA
ATACACGAGAATTGACGGCACAAAGCACAAGTCAACTGGCAAATACATCAAAATTGCTAATGGAAAAACAGGAATTGGGA
TCAGCCTAGTTGACCATACTGAAGTCGTGACGACTCCAAAAGTTACTGTCAACGCGGGTTCAATCAGTGGTCCCTCTGCG
GGGATGATGTTTACACTAGAAATTTACAGTCAGTTGACAGGAAAAGATTTGCGAAACGGGCGCGAAATTGCTGGAACTGG
GACGATTGAACATGACGGAAGCATTGGCCAAATCGGCGGTGTTGATAAAAAAGTAGCCACAGCGAGCAAAGAAGGGGCAA
AGGTCTTCTTGGTGCCTGACTCAGGCACCAAAAAAGAAAGTAGCAACAATTACCTTGGAGCCAAAGCCGCCGCTAAAAAA
CTAAAAACGAAGATGAAAATCGTTCCCGTCAAAACTATTCAGGACGCTTTAGATTATTTAGAAAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

48.406

100

0.488


Multiple sequence alignment