Detailed information NTG0183373

Bioinformatically predicted

Overview

• Name: sbcB
• Type: Machinery gene
• Locus tag: BV139_RS08380
• Genome accession: NZ_CP020012
• Coordinates: 1637476..1638897 (-)
• Length: 473 a.a.
• NCBI ID: WP_005687198.1
• Uniprot ID: -
• Organism: Haemophilus influenzae strain 6P24H2
• Function: promote homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1632476..1643897

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BV139_RS08360 (BV139_1693)	pstA	1633127..1633975 (+)	849	WP_005650601.1	phosphate ABC transporter permease PstA	-
BV139_RS08365 (BV139_1694)	pstB	1633985..1634752 (+)	768	WP_005650603.1	phosphate ABC transporter ATP-binding protein PstB	-
BV139_RS08370 (BV139_1695)	phoB	1634849..1635544 (+)	696	WP_005650606.1	phosphate regulon transcriptional regulator PhoB	-
BV139_RS08375 (BV139_1696)	phoR	1635541..1636818 (+)	1278	WP_005653955.1	phosphate regulon sensor histidine kinase PhoR	-
BV139_RS08380 (BV139_1697)	sbcB	1637476..1638897 (-)	1422	WP_005687198.1	exodeoxyribonuclease I	Machinery gene
BV139_RS08385 (BV139_1698)	-	1638910..1639785 (-)	876	WP_005687199.1	hypothetical protein	-
BV139_RS08390 (BV139_1699)	-	1639788..1640696 (-)	909	WP_005687201.1	DUF5655 domain-containing protein	-

Sequence

Protein

• Length: 473 a.a.
• Molecular weight: 54323.71 Da
• Isoelectric Point: 5.7258

>NTDB_id=183373 BV139_RS08380 WP_005687198.1 1637476..1638897(-) (sbcB) [Haemophilus influenzae strain 6P24H2]
MAKDFSFFIYDYESFGVNPATDRPAQFAGIRTDADFNIIGKPIMFYCKQTNDYLPAPEAVMVTGITPQECNEKGLSEPEF
AANILAEFSQPNTCVMGYNNIRYDDEMTRYTFYRNFIDPYEYSWKNGNSRWDLLDLVRACYALRPEGINWAYDDDGMPSF
RLEKLTKANGIEHENAHDAMADVYATIAMAKLIKEKQPKLFQYFFENRGKKEIEKLVDTGAMTPLVHVSGMLGNYRGNCT
WVAPLAWHPTNQNALIVCDLTGDIDNLLAKSADELRTDLYTKKSKLEERGVSSVPLKLVHINKCPILAPAKTLLPETANR
LGIDRQLCLDNLAKLRASFDIREKVADIFNEERQFASNDNVETELYNGFFSNADKNNMAILRSLPAEKLSEHGLAFEDKR
ILELLFHYRARHFYKTLTRAEQIKWKKYRQNKLEKSAVEFESSLQRLAEEHSDNSEKLSLLQQVYEYGIKLLG

Nucleotide

• Length: 1422 bp

>NTDB_id=183373 BV139_RS08380 WP_005687198.1 1637476..1638897(-) (sbcB) [Haemophilus influenzae strain 6P24H2]
ATGGCAAAAGATTTCAGCTTTTTTATTTACGATTATGAAAGTTTTGGTGTAAATCCAGCAACAGATCGCCCTGCGCAATT
TGCGGGTATTCGTACAGATGCTGATTTTAATATCATTGGTAAACCAATAATGTTTTATTGTAAACAAACCAACGATTATT
TACCGGCTCCTGAAGCCGTAATGGTCACAGGAATTACGCCTCAAGAATGTAATGAAAAGGGGCTTTCAGAGCCTGAATTC
GCCGCAAATATCTTAGCAGAATTTTCCCAACCCAATACTTGTGTCATGGGTTATAACAATATTCGCTATGATGATGAAAT
GACGCGTTATACGTTTTATCGTAATTTTATTGATCCTTATGAATACAGCTGGAAAAATGGGAATTCACGCTGGGATTTGT
TAGATTTAGTGCGAGCCTGTTATGCCTTGCGTCCAGAAGGAATTAATTGGGCTTATGACGATGATGGAATGCCAAGTTTC
CGCTTAGAAAAACTCACTAAAGCAAATGGTATTGAGCATGAAAATGCTCACGATGCCATGGCGGATGTATATGCAACTAT
TGCTATGGCGAAATTAATTAAAGAAAAACAGCCTAAATTATTCCAATATTTCTTTGAAAATCGCGGTAAAAAAGAAATCG
AAAAATTAGTTGATACAGGCGCAATGACACCTTTAGTGCATGTTTCTGGAATGCTAGGGAATTATCGTGGAAATTGCACT
TGGGTTGCACCTTTAGCTTGGCATCCGACAAATCAAAATGCACTCATTGTTTGTGATTTAACTGGCGATATCGATAATTT
ATTAGCCAAAAGTGCGGATGAATTACGGACAGATTTATATACCAAAAAATCTAAATTAGAAGAAAGAGGAGTTTCATCTG
TTCCGTTAAAGCTTGTGCATATCAATAAATGTCCTATTTTAGCACCAGCTAAAACTTTGTTACCAGAAACAGCAAATCGA
TTGGGTATTGATCGACAATTATGCTTGGATAATCTTGCAAAATTACGAGCATCTTTTGATATTCGTGAAAAAGTGGCGGA
TATTTTTAATGAAGAACGTCAATTTGCATCGAATGATAATGTAGAAACTGAGTTATACAATGGCTTTTTTAGCAATGCTG
ATAAAAATAATATGGCTATTTTACGTAGTTTACCTGCAGAAAAATTATCTGAACATGGTTTAGCTTTTGAAGATAAACGT
ATCCTTGAATTATTATTCCATTATCGCGCTCGTCATTTTTATAAAACCCTCACACGCGCTGAACAAATTAAATGGAAAAA
ATACCGACAGAATAAACTTGAAAAAAGTGCGGTAGAGTTTGAATCAAGTTTACAACGTTTAGCTGAGGAACATTCAGATA
ATTCTGAAAAACTATCTTTGCTACAACAAGTATATGAATATGGTATAAAATTACTAGGTTAG

Domains

Predicted by InterProScan.

• Exonuclease C-terminal (ExoI_SH3) (208-468)

• Exonuclease (RNase_T) (9-188)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
sbcB	Vibrio cholerae O1 biovar El Tor strain E7946	55.15	98.52	0.543