Detailed information NTG0183340

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: BV139_RS03345
• Genome accession: NZ_CP020012
• Coordinates: 656715..657713 (+)
• Length: 332 a.a.
• NCBI ID: WP_005686992.1
• Uniprot ID: A0ABY1VT38
• Organism: Haemophilus influenzae strain 6P24H2
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 651715..662713

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BV139_RS03320 (BV139_673)	rbsD	651874..652293 (+)	420	WP_005686983.1	D-ribose pyranase	-
BV139_RS03325 (BV139_674)	rbsA	652307..653788 (+)	1482	WP_005686985.1	ribose ABC transporter ATP-binding protein RbsA	-
BV139_RS03330 (BV139_675)	rbsC	653804..654772 (+)	969	WP_005686986.1	ribose ABC transporter permease	-
BV139_RS03335 (BV139_676)	rbsB	654792..655670 (+)	879	WP_005686988.1	ribose ABC transporter substrate-binding protein RbsB	-
BV139_RS03340 (BV139_677)	rbsK	655768..656688 (+)	921	WP_005686990.1	ribokinase	-
BV139_RS03345 (BV139_678)	cytR	656715..657713 (+)	999	WP_005686992.1	substrate-binding domain-containing protein	Regulator
BV139_RS03350 (BV139_679)	-	657820..658371 (+)	552	WP_005649445.1	TIGR00645 family protein	-
BV139_RS03355 (BV139_680)	rraA	658506..658994 (-)	489	WP_005669389.1	ribonuclease E activity regulator RraA	-
BV139_RS03360 (BV139_681)	menA	659046..659957 (-)	912	WP_005686994.1	1,4-dihydroxy-2-naphthoate octaprenyltransferase	-
BV139_RS03365 (BV139_682)	tsaA	660019..660738 (+)	720	WP_005686995.1	tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO	-
BV139_RS03370 (BV139_683)	tehA	660793..661737 (-)	945	WP_005686997.1	dicarboxylate transporter/tellurite-resistance protein TehA	-

Sequence

Protein

• Length: 332 a.a.
• Molecular weight: 36749.46 Da
• Isoelectric Point: 7.9562

>NTDB_id=183340 BV139_RS03345 WP_005686992.1 656715..657713(+) (cytR) [Haemophilus influenzae strain 6P24H2]
MATMKDIARLAQVSTSTVSHVINGSRFVSDEIREKVMRIVAELNYTPSAVARSLKVRETKTIGLLVTATNNPFFAEVMAG
VEQYCQKNQYNLIIATTGGDAKRLQQNLQTLMHKQVDGLLLMCGDSRFQADIELAISLPLVVMDWWFTELNADKILENSA
LGGYLATKALIDAGHRKIGIITGNLKKSVAQNRLQGYKNALSEAKIALNPHWIVESHFDFEGGVLGIQSLLTQSSRPTAV
FCCSDTIAVGAYQAIQQQGLRIPQDLSIMGYDDIELARYLSPPLSTICQPKAELGKLAVETLLQRIKNPNENYRTLVLEP
TCVLRESIYSFK

Nucleotide

• Length: 999 bp

>NTDB_id=183340 BV139_RS03345 WP_005686992.1 656715..657713(+) (cytR) [Haemophilus influenzae strain 6P24H2]
ATGGCGACAATGAAAGATATTGCACGACTGGCGCAAGTTTCGACTTCCACAGTTTCACATGTCATTAATGGATCGCGTTT
TGTTAGCGATGAAATTCGTGAGAAAGTGATGCGTATTGTCGCTGAACTGAATTACACCCCCTCAGCTGTTGCACGAAGCC
TTAAGGTGCGCGAAACCAAAACTATCGGACTACTTGTCACCGCAACAAATAATCCCTTCTTTGCGGAAGTGATGGCTGGC
GTGGAGCAATATTGTCAGAAAAATCAATATAATCTTATTATTGCTACAACGGGTGGAGATGCCAAACGCCTACAACAAAA
TCTGCAAACTCTAATGCACAAACAAGTGGATGGTTTGCTTTTGATGTGTGGTGATAGCCGTTTTCAGGCTGATATAGAGT
TAGCCATTTCGCTGCCACTCGTTGTGATGGACTGGTGGTTTACTGAGTTAAATGCAGATAAAATACTCGAAAATTCAGCA
CTTGGTGGCTATTTGGCGACAAAAGCATTAATTGATGCAGGACATCGTAAAATTGGCATTATTACGGGGAATCTCAAAAA
GTCTGTCGCACAAAATCGTTTGCAAGGTTATAAAAATGCGCTCTCGGAAGCAAAAATTGCGTTAAATCCTCATTGGATTG
TCGAAAGTCATTTTGACTTTGAAGGCGGTGTACTTGGCATACAATCTTTACTTACTCAATCTTCACGTCCAACAGCAGTT
TTTTGTTGTAGTGACACCATTGCTGTCGGTGCATACCAAGCTATTCAGCAACAAGGCTTACGTATTCCGCAAGATCTTTC
AATTATGGGTTATGATGACATTGAATTGGCTCGTTATCTCTCACCTCCCCTTTCCACCATTTGCCAACCGAAAGCTGAAC
TTGGCAAACTCGCTGTTGAAACACTATTGCAACGAATTAAAAATCCTAATGAAAATTACCGCACTTTGGTTTTAGAACCG
ACTTGTGTGTTAAGAGAGTCTATTTACAGTTTCAAATAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-327)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	36.89	98.795	0.364
cytR	Vibrio cholerae C6706	36.585	98.795	0.361