Detailed information NTG0183308

Bioinformatically predicted

Overview

• Name: sbcB
• Type: Machinery gene
• Locus tag: BV134_RS07920
• Genome accession: NZ_CP020011
• Coordinates: 1558563..1559984 (-)
• Length: 473 a.a.
• NCBI ID: WP_050822584.1
• Uniprot ID: -
• Organism: Haemophilus influenzae strain 67P56H1
• Function: promote homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1553563..1564984

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BV134_RS07900 (BV134_1598)	pstA	1554154..1555002 (+)	849	WP_005650601.1	phosphate ABC transporter permease PstA	-
BV134_RS07905 (BV134_1599)	pstB	1555012..1555779 (+)	768	WP_005650603.1	phosphate ABC transporter ATP-binding protein PstB	-
BV134_RS07910 (BV134_1600)	phoB	1555876..1556571 (+)	696	WP_005650606.1	phosphate regulon transcriptional regulator PhoB	-
BV134_RS07915 (BV134_1601)	phoR	1556568..1557845 (+)	1278	WP_005691999.1	phosphate regulon sensor histidine kinase PhoR	-
BV134_RS07920 (BV134_1602)	sbcB	1558563..1559984 (-)	1422	WP_050822584.1	exodeoxyribonuclease I	Machinery gene
BV134_RS07925 (BV134_1603)	-	1559997..1560872 (-)	876	WP_014550744.1	hypothetical protein	-
BV134_RS07930 (BV134_1604)	-	1560875..1561783 (-)	909	WP_005687201.1	DUF5655 domain-containing protein	-

Sequence

Protein

• Length: 473 a.a.
• Molecular weight: 54322.59 Da
• Isoelectric Point: 5.1891

>NTDB_id=183308 BV134_RS07920 WP_050822584.1 1558563..1559984(-) (sbcB) [Haemophilus influenzae strain 67P56H1]
MAKDFSFFIYDYESFGVNPATDRPAQFAGIRTDADFNIIGEPIMFYCKQTNDYLPAPEAVMVTGITPQECNEKGLSEPEF
AANILAEFSQPNTCVMGYNNIRYDDEMTRYTFYRNFIDPYEYSWKNGNSRWDLLDLVRACYALRPEGINWAYDDDGMPSF
RLEKLTKANGIEHENAHDAMADVYATIAMAKLIKEKQPKLFQYFFENRGKKEIEKLVDIGAMTPLVHVSGMLGNYRGNCT
WVAPLSWHPTNQNALIVCDLTGDIDNLLAKSADELRTDLYTKKSELEERGVSSVPLKLVHINKCPILAPAKTLLPETANR
LGIDRQLCLDNLAKLRASFDIREKVADIFNEERQFASNDNVETELYNGFFSNADKNNMAILRSLPAEKLSEHGLAFEDKR
ILELLFHYRARHFYKTLTRAEQIKWQKYRQNKLEKSAVEFQSGLQRLAEEHSDNSEKLSLLQQVYEYGIKLLG

Nucleotide

• Length: 1422 bp

>NTDB_id=183308 BV134_RS07920 WP_050822584.1 1558563..1559984(-) (sbcB) [Haemophilus influenzae strain 67P56H1]
ATGGCAAAAGATTTCAGCTTTTTTATTTACGATTATGAAAGTTTTGGTGTAAATCCAGCAACAGATCGTCCTGCGCAATT
TGCGGGTATTCGTACAGATGCTGATTTTAATATCATTGGCGAACCAATAATGTTTTATTGTAAACAAACCAACGATTATT
TACCGGCTCCTGAAGCCGTAATGGTCACAGGAATTACGCCTCAAGAATGTAATGAAAAGGGGCTTTCAGAGCCTGAATTC
GCCGCAAATATCTTAGCAGAATTTTCCCAACCCAATACTTGTGTCATGGGTTATAACAATATTCGCTATGATGATGAAAT
GACGCGTTATACGTTTTATCGTAATTTTATTGATCCTTATGAATACAGCTGGAAAAATGGGAATTCACGGTGGGATTTGT
TAGATTTAGTACGAGCTTGTTATGCCTTGCGTCCAGAAGGGATTAATTGGGCTTATGACGATGATGGAATGCCAAGTTTC
CGCTTAGAAAAACTCACTAAAGCAAATGGTATTGAGCATGAAAATGCTCACGATGCCATGGCGGATGTATATGCAACTAT
TGCTATGGCGAAATTAATTAAAGAAAAACAACCTAAATTATTCCAATATTTCTTTGAAAATCGCGGTAAAAAAGAAATCG
AAAAATTAGTTGATATAGGAGCGATGACACCTTTAGTGCATGTTTCTGGAATGCTAGGGAATTATCGTGGAAATTGCACT
TGGGTTGCACCTTTATCTTGGCATCCGACAAATCAAAATGCATTAATTGTGTGTGATTTAACTGGCGATATCGATAATTT
ATTAGCCAAAAGTGCGGATGAATTACGGACAGATTTATATACCAAAAAATCTGAATTAGAAGAAAGAGGAGTTTCATCCG
TTCCGTTAAAACTTGTGCATATTAATAAATGTCCTATTTTAGCACCAGCTAAAACTTTGTTACCAGAAACAGCAAATCGA
TTGGGTATTGATCGACAATTATGCTTGGATAATCTTGCAAAATTACGAGCATCTTTTGATATTCGTGAAAAAGTGGCGGA
TATTTTTAATGAAGAACGTCAATTTGCATCGAATGATAATGTAGAAACTGAGTTATACAATGGCTTTTTTAGCAATGCTG
ATAAAAATAATATGGCTATTTTACGTAGTTTACCTGCAGAAAAATTATCTGAACATGGTTTAGCTTTTGAAGATAAACGT
ATCCTTGAATTATTGTTCCATTATCGTGCTCGCCACTTTTATAAAACCCTCACACGCGCTGAACAAATTAAATGGCAAAA
ATACCGACAGAATAAACTTGAAAAAAGTGCGGTAGAGTTTCAATCAGGTTTACAACGTTTAGCCGAGGAACATTCAGATA
ATTCTGAAAAACTATCTTTGCTACAACAAGTATATGAATATGGTATAAAATTACTAGGTTAG

Domains

Predicted by InterProScan.

• Exonuclease C-terminal (ExoI_SH3) (208-468)

• Exonuclease (RNase_T) (9-188)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
sbcB	Vibrio cholerae O1 biovar El Tor strain E7946	55.365	98.52	0.545