Detailed information
Bioinformatically predicted
Overview
| Name | radA/sms | Type | Machinery gene |
| Locus tag | BV134_RS06775 | Genome accession | NZ_CP020011 |
| Coordinates | 1358584..1359960 (+) | Length | 458 a.a. |
| NCBI ID | WP_005668320.1 | Uniprot ID | A0ABY1VUX8 |
| Organism | Haemophilus influenzae strain 67P56H1 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 1353584..1364960
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BV134_RS06770 (BV134_1373) | - | 1357400..1358446 (+) | 1047 | WP_105175716.1 | CYTH domain-containing protein | - |
| BV134_RS06775 (BV134_1374) | radA/sms | 1358584..1359960 (+) | 1377 | WP_005668320.1 | DNA repair protein RadA | Machinery gene |
| BV134_RS06780 (BV134_1375) | lrp | 1360040..1360519 (+) | 480 | WP_005664572.1 | leucine-responsive transcriptional regulator Lrp | - |
| BV134_RS06785 (BV134_1376) | - | 1360521..1363280 (+) | 2760 | WP_050823043.1 | DNA translocase FtsK | - |
| BV134_RS06790 (BV134_1377) | lolA | 1363298..1363915 (+) | 618 | WP_005661471.1 | outer membrane lipoprotein chaperone LolA | - |
Sequence
Protein
Download Length: 458 a.a. Molecular weight: 49425.01 Da Isoelectric Point: 8.1109
>NTDB_id=183305 BV134_RS06775 WP_005668320.1 1358584..1359960(+) (radA/sms) [Haemophilus influenzae strain 67P56H1]
MAKAPKTAYVCNDCGAEFSRWQGQCSACKAWNTITEVRLISTAKSKNDRFSGYAGETQAKIQTLSEISLQETPRFSSGFN
ELDRVLGGGIVPGSAILIGGHPGAGKSTLLLQVMCGLAKNMTALYVTGEESLQQVAMRASRLGLPNDQLKMLSETSVEQI
CNLADQLKPQIIVVDSIQVMHLADIQSSPGSVAQVRECASFLTRYAKTRQVAIIMVGHVTKDGTLAGPKVLEHAIDCSLL
LEGEADSRYRTLRSHKNRFGAVNELGVFGMTEQGLREVKNPSAIFLSRGDEITSGSSVMVLWEGTRPLLVEIQALVDHSM
LANPRRVAVGLEQNRLALLLAVLHRHGGLQMADQDVFVNVVGGVKVSETSADLALLLALISSFRNRPLPQDLVIFGEVGL
AGEIRPVPSGQERISEAAKHGFKRAIVPFGNKPKSAVENMQVFTVKKLTDALAVLDNL
MAKAPKTAYVCNDCGAEFSRWQGQCSACKAWNTITEVRLISTAKSKNDRFSGYAGETQAKIQTLSEISLQETPRFSSGFN
ELDRVLGGGIVPGSAILIGGHPGAGKSTLLLQVMCGLAKNMTALYVTGEESLQQVAMRASRLGLPNDQLKMLSETSVEQI
CNLADQLKPQIIVVDSIQVMHLADIQSSPGSVAQVRECASFLTRYAKTRQVAIIMVGHVTKDGTLAGPKVLEHAIDCSLL
LEGEADSRYRTLRSHKNRFGAVNELGVFGMTEQGLREVKNPSAIFLSRGDEITSGSSVMVLWEGTRPLLVEIQALVDHSM
LANPRRVAVGLEQNRLALLLAVLHRHGGLQMADQDVFVNVVGGVKVSETSADLALLLALISSFRNRPLPQDLVIFGEVGL
AGEIRPVPSGQERISEAAKHGFKRAIVPFGNKPKSAVENMQVFTVKKLTDALAVLDNL
Nucleotide
Download Length: 1377 bp
>NTDB_id=183305 BV134_RS06775 WP_005668320.1 1358584..1359960(+) (radA/sms) [Haemophilus influenzae strain 67P56H1]
ATGGCTAAAGCCCCAAAAACAGCTTATGTATGTAACGATTGTGGTGCGGAGTTTTCTCGTTGGCAAGGGCAATGTTCCGC
TTGTAAAGCGTGGAATACAATCACGGAAGTGCGCTTAATTTCCACGGCAAAATCAAAAAATGATCGTTTTAGTGGCTATG
CGGGGGAAACTCAGGCAAAAATTCAAACGCTCTCTGAAATTAGTTTGCAAGAAACGCCTCGTTTTTCCAGTGGTTTTAAT
GAATTGGATCGTGTACTTGGTGGCGGGATCGTACCGGGTAGTGCGATTTTAATTGGAGGGCATCCTGGAGCAGGGAAAAG
TACATTGTTATTACAGGTTATGTGTGGTTTGGCAAAAAATATGACCGCACTTTATGTAACGGGAGAGGAATCATTACAAC
AGGTTGCGATGCGTGCAAGCCGATTGGGATTGCCAAATGATCAATTAAAAATGTTGTCAGAAACCTCTGTGGAACAGATT
TGTAATTTGGCGGATCAATTAAAACCGCAAATTATCGTGGTGGATTCTATCCAAGTAATGCATTTGGCAGATATTCAATC
ATCGCCAGGCAGCGTAGCTCAAGTGCGTGAATGTGCTTCTTTCCTCACTCGTTATGCGAAAACTCGCCAAGTGGCGATTA
TTATGGTTGGACACGTTACGAAAGACGGAACCCTTGCAGGGCCTAAAGTGTTAGAGCATGCCATTGACTGTTCATTGTTA
TTAGAAGGCGAAGCCGATTCTCGTTATCGTACTTTGCGTAGCCATAAAAACCGTTTTGGTGCAGTCAATGAATTAGGTGT
ATTTGGAATGACAGAGCAGGGTTTGCGCGAAGTGAAAAATCCATCGGCGATTTTTTTAAGTCGCGGAGATGAAATTACGT
CAGGCAGTTCTGTTATGGTACTTTGGGAGGGTACTCGCCCTCTTTTAGTTGAAATTCAAGCCTTGGTGGATCATTCAATG
CTGGCAAATCCTCGCCGTGTTGCGGTGGGATTAGAGCAAAATCGCTTAGCACTATTATTGGCGGTGTTACATCGACATGG
TGGCTTACAAATGGCGGATCAAGATGTTTTTGTAAATGTGGTTGGTGGTGTAAAAGTCAGTGAAACCAGTGCAGATTTAG
CTTTGTTGCTTGCGTTAATTTCAAGTTTCCGTAATCGCCCTTTGCCGCAAGATTTAGTGATTTTTGGCGAAGTTGGATTA
GCGGGAGAAATTCGTCCTGTGCCAAGTGGACAGGAACGTATTAGCGAGGCTGCAAAACACGGTTTTAAACGTGCTATTGT
TCCTTTTGGTAACAAGCCGAAAAGTGCGGTCGAAAATATGCAGGTTTTTACTGTGAAAAAACTCACGGATGCGCTCGCTG
TGTTAGATAATTTATAA
ATGGCTAAAGCCCCAAAAACAGCTTATGTATGTAACGATTGTGGTGCGGAGTTTTCTCGTTGGCAAGGGCAATGTTCCGC
TTGTAAAGCGTGGAATACAATCACGGAAGTGCGCTTAATTTCCACGGCAAAATCAAAAAATGATCGTTTTAGTGGCTATG
CGGGGGAAACTCAGGCAAAAATTCAAACGCTCTCTGAAATTAGTTTGCAAGAAACGCCTCGTTTTTCCAGTGGTTTTAAT
GAATTGGATCGTGTACTTGGTGGCGGGATCGTACCGGGTAGTGCGATTTTAATTGGAGGGCATCCTGGAGCAGGGAAAAG
TACATTGTTATTACAGGTTATGTGTGGTTTGGCAAAAAATATGACCGCACTTTATGTAACGGGAGAGGAATCATTACAAC
AGGTTGCGATGCGTGCAAGCCGATTGGGATTGCCAAATGATCAATTAAAAATGTTGTCAGAAACCTCTGTGGAACAGATT
TGTAATTTGGCGGATCAATTAAAACCGCAAATTATCGTGGTGGATTCTATCCAAGTAATGCATTTGGCAGATATTCAATC
ATCGCCAGGCAGCGTAGCTCAAGTGCGTGAATGTGCTTCTTTCCTCACTCGTTATGCGAAAACTCGCCAAGTGGCGATTA
TTATGGTTGGACACGTTACGAAAGACGGAACCCTTGCAGGGCCTAAAGTGTTAGAGCATGCCATTGACTGTTCATTGTTA
TTAGAAGGCGAAGCCGATTCTCGTTATCGTACTTTGCGTAGCCATAAAAACCGTTTTGGTGCAGTCAATGAATTAGGTGT
ATTTGGAATGACAGAGCAGGGTTTGCGCGAAGTGAAAAATCCATCGGCGATTTTTTTAAGTCGCGGAGATGAAATTACGT
CAGGCAGTTCTGTTATGGTACTTTGGGAGGGTACTCGCCCTCTTTTAGTTGAAATTCAAGCCTTGGTGGATCATTCAATG
CTGGCAAATCCTCGCCGTGTTGCGGTGGGATTAGAGCAAAATCGCTTAGCACTATTATTGGCGGTGTTACATCGACATGG
TGGCTTACAAATGGCGGATCAAGATGTTTTTGTAAATGTGGTTGGTGGTGTAAAAGTCAGTGAAACCAGTGCAGATTTAG
CTTTGTTGCTTGCGTTAATTTCAAGTTTCCGTAATCGCCCTTTGCCGCAAGATTTAGTGATTTTTGGCGAAGTTGGATTA
GCGGGAGAAATTCGTCCTGTGCCAAGTGGACAGGAACGTATTAGCGAGGCTGCAAAACACGGTTTTAAACGTGCTATTGT
TCCTTTTGGTAACAAGCCGAAAAGTGCGGTCGAAAATATGCAGGTTTTTACTGTGAAAAAACTCACGGATGCGCTCGCTG
TGTTAGATAATTTATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| radA/sms | Bacillus subtilis subsp. subtilis str. 168 |
46.623 |
100 |
0.467 |
| radA | Streptococcus mitis NCTC 12261 |
43.267 |
98.908 |
0.428 |
| radA | Streptococcus mitis SK321 |
43.267 |
98.908 |
0.428 |
| radA | Streptococcus pneumoniae TIGR4 |
44.755 |
93.668 |
0.419 |
| radA | Streptococcus pneumoniae D39 |
44.755 |
93.668 |
0.419 |
| radA | Streptococcus pneumoniae Rx1 |
44.755 |
93.668 |
0.419 |
| radA | Streptococcus pneumoniae R6 |
44.755 |
93.668 |
0.419 |