Detailed information    

insolico Bioinformatically predicted

Overview

Name   luxS   Type   Regulator
Locus tag   BV131_RS02750 Genome accession   NZ_CP020010
Coordinates   550334..550837 (+) Length   167 a.a.
NCBI ID   WP_005662536.1    Uniprot ID   -
Organism   Haemophilus influenzae strain 67P38H1     
Function   induction of competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 545334..555837
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BV131_RS02710 (BV131_557) atpF 545530..546000 (-) 471 WP_005652038.1 F0F1 ATP synthase subunit B -
  BV131_RS02715 (BV131_558) atpE 546050..546304 (-) 255 WP_005652035.1 F0F1 ATP synthase subunit C -
  BV131_RS02720 (BV131_559) atpB 546360..547148 (-) 789 WP_005629251.1 F0F1 ATP synthase subunit A -
  BV131_RS02725 (BV131_560) - 547185..547559 (-) 375 WP_005662542.1 ATP synthase subunit I -
  BV131_RS02730 (BV131_561) rsmG 547685..548296 (-) 612 WP_014550391.1 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG -
  BV131_RS02735 (BV131_562) - 548436..548813 (-) 378 WP_005652029.1 PRD domain-containing protein -
  BV131_RS02740 (BV131_564) - 548929..549531 (+) 603 WP_014550390.1 beta-phosphoglucomutase family hydrolase -
  BV131_RS02745 (BV131_565) - 549531..550004 (+) 474 WP_005656551.1 YqaA family protein -
  BV131_RS02750 (BV131_566) luxS 550334..550837 (+) 504 WP_005662536.1 S-ribosylhomocysteine lyase Regulator
  BV131_RS09120 - 551144..551338 (+) 195 WP_228840878.1 helix-turn-helix domain-containing protein -
  BV131_RS09360 - 551597..551709 (+) 113 Protein_507 IS3 family transposase -
  BV131_RS02760 (BV131_567) aphA 551756..552463 (-) 708 WP_014550389.1 acid phosphatase AphA -
  BV131_RS02765 (BV131_568) hslV 552683..553210 (+) 528 WP_005662532.1 ATP-dependent protease subunit HslV -
  BV131_RS02770 (BV131_569) hslU 553221..554555 (+) 1335 WP_042593308.1 HslU--HslV peptidase ATPase subunit -
  BV131_RS02775 (BV131_570) - 554625..555677 (-) 1053 WP_005686979.1 extracellular solute-binding protein -

Sequence

Protein


Download         Length: 167 a.a.        Molecular weight: 18571.22 Da        Isoelectric Point: 4.9925

>NTDB_id=183211 BV131_RS02750 WP_005662536.1 550334..550837(+) (luxS) [Haemophilus influenzae strain 67P38H1]
MPLLDSFKVDHTKMNAPAVRIAKTMRTPKGDNITVFDLRFCIPNKEILSPKGIHTLEHLFAGFMRDHLNGDSIEIIDISP
MGCRTGFYMSLIGTPNEQEVSEAWLASMQDVLGVQDQASIPELNIYQCGSYTEHSLEDAHEIAKNVIARGIGVNKNEDLS
LDNSLLK

Nucleotide


Download         Length: 504 bp        

>NTDB_id=183211 BV131_RS02750 WP_005662536.1 550334..550837(+) (luxS) [Haemophilus influenzae strain 67P38H1]
ATGCCATTACTTGATAGTTTTAAAGTGGATCACACAAAAATGAACGCACCTGCAGTACGCATTGCAAAAACGATGCGCAC
GCCAAAAGGCGATAATATTACTGTTTTTGATTTACGTTTTTGTATTCCAAACAAAGAAATTCTTTCCCCAAAAGGCATTC
ATACACTTGAACATTTATTTGCTGGATTTATGCGCGATCACTTAAATGGCGATAGCATAGAAATTATTGATATTTCTCCG
ATGGGATGTCGCACGGGATTTTATATGTCTTTGATTGGCACACCAAATGAACAGGAAGTATCTGAGGCTTGGTTAGCTTC
AATGCAAGATGTTTTAGGTGTACAAGATCAAGCTTCTATTCCCGAATTAAATATCTATCAATGCGGAAGCTATACGGAAC
ATTCCTTAGAAGATGCACACGAAATTGCCAAAAATGTTATCGCACGCGGTATAGGTGTAAATAAAAATGAAGATTTGTCA
CTCGATAATTCCTTATTAAAATAG

Domains

Predicted by InterProScan.

S-Ribosylhomocysteinase (LuxS) (LuxS)

(4-153)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  luxS Vibrio cholerae strain A1552

74.096

99.401

0.737