Detailed information NTG0183182

Bioinformatically predicted

Overview

• Name: sbcB
• Type: Machinery gene
• Locus tag: BV122_RS08070
• Genome accession: NZ_CP020009
• Coordinates: 1583779..1585200 (-)
• Length: 473 a.a.
• NCBI ID: WP_042611926.1
• Uniprot ID: -
• Organism: Haemophilus influenzae strain 5P54H1
• Function: promote homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1578779..1590200

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BV122_RS08050 (BV122_1653)	pstA	1579346..1580194 (+)	849	WP_005650601.1	phosphate ABC transporter permease PstA	-
BV122_RS08055 (BV122_1654)	pstB	1580204..1580971 (+)	768	WP_005650603.1	phosphate ABC transporter ATP-binding protein PstB	-
BV122_RS08060 (BV122_1655)	phoB	1581068..1581763 (+)	696	WP_005650606.1	phosphate regulon transcriptional regulator PhoB	-
BV122_RS08065 (BV122_1656)	phoR	1581760..1583037 (+)	1278	WP_005653955.1	phosphate regulon sensor histidine kinase PhoR	-
BV122_RS08070 (BV122_1657)	sbcB	1583779..1585200 (-)	1422	WP_042611926.1	exodeoxyribonuclease I	Machinery gene
BV122_RS08075 (BV122_1658)	-	1585213..1586088 (-)	876	WP_011272627.1	hypothetical protein	-
BV122_RS08080 (BV122_1659)	-	1586092..1587000 (-)	909	WP_005650618.1	DUF5655 domain-containing protein	-

Sequence

Protein

• Length: 473 a.a.
• Molecular weight: 54325.64 Da
• Isoelectric Point: 5.2972

>NTDB_id=183182 BV122_RS08070 WP_042611926.1 1583779..1585200(-) (sbcB) [Haemophilus influenzae strain 5P54H1]
MAKDFSFFIYDYESFGVNPATDRPAQFAGIRTDADFNIIGKPIMFYCKQTNDYLPAPEAVMVTGITPQECNEKGLSEPEF
AANILAEFSQPNTCVMGYNNIRYDDEMTRYTFYRNFIDPYEYSWKNGNSRWDLLDLVRACYALRPEGINWAYDDDGMPSF
RLEKLTKANGIEHENAHDAMADVYATIAMAKLIKEKQPKLFQYFFENRGKKEIEKLVDTGAMTPLVHVSGMLGNYRGNCT
WVAPLAWHPTNQNALIVCDLTGDIDNLLAKSADELRTDLYTKKSELEERGVSSVPLKLVHINKCPILAPAKTLLPETADR
LGIDRQLCLDNLAKLRASFDIREKVADIFNEERQFASNDNVETELYNGFFSNADKNNMAILRSLPAEKLSEHGLAFEDKR
ILELLFHYRARHFYKTLTRAEQIKWKKYRQNKLEKSAVEFESSLQRLAEEHSDNSEKLSLLQQVYEYGIKLLG

Nucleotide

• Length: 1422 bp

>NTDB_id=183182 BV122_RS08070 WP_042611926.1 1583779..1585200(-) (sbcB) [Haemophilus influenzae strain 5P54H1]
ATGGCAAAAGATTTCAGCTTTTTTATTTACGATTATGAAAGTTTTGGTGTAAATCCAGCAACAGATCGCCCTGCGCAATT
TGCGGGTATTCGTACAGATGCTGATTTTAATATCATTGGTAAACCAATAATGTTTTATTGTAAACAAACCAACGATTATT
TACCGGCTCCTGAAGCCGTAATGGTCACAGGAATTACGCCTCAAGAATGTAATGAAAAGGGGCTTTCAGAGCCTGAATTC
GCCGCAAATATCTTAGCAGAATTTTCCCAACCCAATACTTGTGTCATGGGTTATAACAATATTCGCTATGATGATGAAAT
GACGCGTTATACGTTTTATCGTAATTTTATTGATCCTTATGAATACAGCTGGAAAAATGGGAATTCACGCTGGGATTTGT
TAGATTTAGTGCGAGCCTGTTATGCCTTGCGTCCAGAAGGGATTAATTGGGCTTATGATGATGATGGAATGCCAAGTTTC
CGCTTAGAAAAACTCACTAAAGCAAATGGTATTGAGCATGAAAATGCTCACGATGCCATGGCGGATGTATATGCAACTAT
TGCTATGGCGAAATTAATTAAAGAAAAACAACCTAAATTATTCCAATATTTCTTTGAAAATCGCGGTAAAAAAGAAATCG
AAAAATTAGTTGATACAGGCGCAATGACACCTTTAGTGCATGTTTCTGGGATGTTAGGGAATTATCGTGGAAATTGCACT
TGGGTTGCACCTTTAGCTTGGCATCCGACAAATCAAAATGCACTCATTGTTTGTGATTTAACTGGCGATATCGATAATTT
ATTAGCCAAAAGTGCGGATGAATTACGGACAGATTTATATACCAAAAAATCTGAATTAGAAGAAAGGGGAGTTTCATCCG
TTCCATTAAAGCTTGTGCATATCAATAAATGTCCTATTTTAGCACCAGCTAAAACTTTGTTACCAGAAACAGCAGATCGA
TTGGGTATTGATCGACAATTATGCTTGGATAATCTTGCAAAATTACGAGCATCTTTTGATATTCGTGAAAAAGTGGCGGA
TATTTTTAATGAAGAACGTCAATTTGCATCGAATGATAATGTAGAAACTGAGTTATACAATGGCTTTTTTAGCAATGCTG
ATAAAAATAATATGGCTATTTTACGTAGTTTACCTGCAGAAAAATTATCTGAACATGGTTTAGCTTTTGAAGATAAACGT
ATCCTTGAATTATTGTTCCATTATCGCGCTCGTCATTTTTATAAAACCCTCACACGCGCTGAACAAATTAAATGGAAAAA
ATACCGACAGAATAAACTTGAAAAAAGTGCGGTAGAGTTTGAATCAAGTTTACAACGTTTAGCTGAGGAACATTCAGATA
ATTCTGAAAAACTATCTTTGCTACAACAAGTATATGAATATGGTATAAAATTACTAGGTTAG

Domains

Predicted by InterProScan.

• Exonuclease C-terminal (ExoI_SH3) (208-468)

• Exonuclease (RNase_T) (9-188)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
sbcB	Vibrio cholerae O1 biovar El Tor strain E7946	55.15	98.52	0.543