Detailed information
Bioinformatically predicted
Overview
| Name | comGG | Type | Machinery gene |
| Locus tag | LLUC08_RS10795 | Genome accession | NZ_CP015903 |
| Coordinates | 2192116..2192400 (-) | Length | 94 a.a. |
| NCBI ID | WP_025017139.1 | Uniprot ID | - |
| Organism | Lactococcus lactis subsp. lactis strain UC08 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2187116..2197400
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LLUC08_RS10765 (LLUC08_2087) | - | 2187556..2187933 (-) | 378 | WP_003129983.1 | pyridoxamine 5'-phosphate oxidase family protein | - |
| LLUC08_RS10770 (LLUC08_2088) | - | 2188138..2189004 (+) | 867 | WP_025017140.1 | RluA family pseudouridine synthase | - |
| LLUC08_RS10775 (LLUC08_2089) | - | 2189042..2189851 (-) | 810 | WP_014570791.1 | metal ABC transporter permease | - |
| LLUC08_RS10780 (LLUC08_2090) | - | 2189844..2190581 (-) | 738 | WP_012898617.1 | metal ABC transporter ATP-binding protein | - |
| LLUC08_RS10785 (LLUC08_2091) | - | 2190758..2191600 (-) | 843 | WP_015427160.1 | metal ABC transporter substrate-binding protein | - |
| LLUC08_RS10790 (LLUC08_2092) | - | 2191597..2192034 (-) | 438 | WP_003129992.1 | zinc-dependent MarR family transcriptional regulator | - |
| LLUC08_RS10795 (LLUC08_2093) | comGG | 2192116..2192400 (-) | 285 | WP_025017139.1 | competence type IV pilus minor pilin ComGG | Machinery gene |
| LLUC08_RS10800 (LLUC08_2094) | comGF | 2192439..2192885 (-) | 447 | WP_029344525.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| LLUC08_RS10805 (LLUC08_2095) | comGE | 2192848..2193144 (-) | 297 | WP_010906316.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| LLUC08_RS10810 (LLUC08_2096) | comGD | 2193234..2193515 (-) | 282 | WP_237025754.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | Machinery gene |
| LLUC08_RS10815 (LLUC08_2097) | comGC | 2193508..2193891 (-) | 384 | WP_081040674.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| LLUC08_RS10820 (LLUC08_2098) | comGB | 2193905..2194978 (-) | 1074 | WP_081041295.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| LLUC08_RS10825 (LLUC08_2099) | comGA | 2194872..2195810 (-) | 939 | WP_031561106.1 | competence type IV pilus ATPase ComGA | Machinery gene |
Sequence
Protein
Download Length: 94 a.a. Molecular weight: 10813.05 Da Isoelectric Point: 5.0604
>NTDB_id=183142 LLUC08_RS10795 WP_025017139.1 2192116..2192400(-) (comGG) [Lactococcus lactis subsp. lactis strain UC08]
MFSMFLQFYLERQIDDARQLRSEKEQLTAELMVSVALKTDLKSQGQIHFDSGDLSYNLLTDSSASSKITDHSSDENTYQF
SIHLKDGTNFQIKK
MFSMFLQFYLERQIDDARQLRSEKEQLTAELMVSVALKTDLKSQGQIHFDSGDLSYNLLTDSSASSKITDHSSDENTYQF
SIHLKDGTNFQIKK
Nucleotide
Download Length: 285 bp
>NTDB_id=183142 LLUC08_RS10795 WP_025017139.1 2192116..2192400(-) (comGG) [Lactococcus lactis subsp. lactis strain UC08]
ATGTTTTCAATGTTTCTTCAGTTCTATTTGGAAAGGCAAATAGATGATGCTCGACAATTAAGAAGTGAAAAGGAGCAGTT
AACAGCTGAATTAATGGTGTCAGTAGCTTTAAAGACTGATTTAAAATCTCAAGGTCAAATTCATTTTGATTCAGGGGATT
TGTCCTACAATTTACTGACAGACTCGTCAGCTAGTTCAAAAATTACTGACCATTCAAGTGATGAAAATACCTATCAATTT
AGTATCCATCTAAAAGATGGCACAAACTTTCAAATAAAAAAATAA
ATGTTTTCAATGTTTCTTCAGTTCTATTTGGAAAGGCAAATAGATGATGCTCGACAATTAAGAAGTGAAAAGGAGCAGTT
AACAGCTGAATTAATGGTGTCAGTAGCTTTAAAGACTGATTTAAAATCTCAAGGTCAAATTCATTTTGATTCAGGGGATT
TGTCCTACAATTTACTGACAGACTCGTCAGCTAGTTCAAAAATTACTGACCATTCAAGTGATGAAAATACCTATCAATTT
AGTATCCATCTAAAAGATGGCACAAACTTTCAAATAAAAAAATAA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGG | Lactococcus lactis subsp. cremoris KW2 |
58.511 |
100 |
0.585 |