Detailed information
Bioinformatically predicted
Overview
| Name | comFC | Type | Machinery gene |
| Locus tag | LLJM1_RS06045 | Genome accession | NZ_CP015899 |
| Coordinates | 1100111..1100761 (-) | Length | 216 a.a. |
| NCBI ID | WP_032951095.1 | Uniprot ID | A0A1V0PHJ5 |
| Organism | Lactococcus cremoris strain JM1 | ||
| Function | ssDNA transport into the cell (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1095111..1105761
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LLJM1_RS06015 (LLJM1_1148) | - | 1095302..1096834 (+) | 1533 | WP_015082368.1 | Nramp family divalent metal transporter | - |
| LLJM1_RS06020 (LLJM1_1149) | - | 1096908..1097876 (+) | 969 | WP_021165232.1 | PhoH family protein | - |
| LLJM1_RS06025 (LLJM1_1150) | - | 1097946..1098440 (+) | 495 | WP_011676092.1 | NUDIX hydrolase | - |
| LLJM1_RS06030 (LLJM1_1151) | ybeY | 1098531..1099019 (+) | 489 | WP_032951096.1 | rRNA maturation RNase YbeY | - |
| LLJM1_RS06035 (LLJM1_1152) | - | 1099003..1099458 (+) | 456 | WP_011676094.1 | diacylglycerol kinase family protein | - |
| LLJM1_RS06040 (LLJM1_1153) | - | 1099475..1100053 (+) | 579 | WP_011676095.1 | nucleotidyltransferase family protein | - |
| LLJM1_RS06045 (LLJM1_1154) | comFC | 1100111..1100761 (-) | 651 | WP_032951095.1 | ComF family protein | Machinery gene |
| LLJM1_RS06050 (LLJM1_1155) | comFA | 1100761..1101219 (-) | 459 | WP_081196108.1 | helicase-related protein | Machinery gene |
| LLJM1_RS06055 (LLJM1_1156) | - | 1101313..1102248 (+) | 936 | WP_031559015.1 | IS30 family transposase | - |
| LLJM1_RS06060 (LLJM1_1157) | comFA | 1102346..1103131 (-) | 786 | WP_021214114.1 | DEAD/DEAH box helicase family protein | Machinery gene |
| LLJM1_RS06065 (LLJM1_1158) | - | 1103188..1103823 (+) | 636 | WP_011676097.1 | YigZ family protein | - |
| LLJM1_RS06070 (LLJM1_1159) | - | 1103865..1104323 (+) | 459 | WP_063280772.1 | VanZ family protein | - |
| LLJM1_RS06075 (LLJM1_1160) | - | 1104372..1105319 (+) | 948 | WP_003130410.1 | IS30 family transposase | - |
Sequence
Protein
Download Length: 216 a.a. Molecular weight: 25214.49 Da Isoelectric Point: 9.8562
>NTDB_id=182932 LLJM1_RS06045 WP_032951095.1 1100111..1100761(-) (comFC) [Lactococcus cremoris strain JM1]
MQTCLLCSRIIKQTLTFSEFFLLKNNRNLICNKCQSLFKKIPNERCPRCSKANSKGICADCLKWEEKGIIVNHQSIFIYN
QAMKDYFSLYKFMGDYRLHEVFDSYFKNLSKKIPLVPIPVSPKRLQERGFNQVTAFLKDRAYLDLLEKEDTVRQSSLNRE
GRLSTSNPFKLKEGEKIPQKIILIDDIYTTGTTFYHAIKTLKKANPIEITTFSLCR
MQTCLLCSRIIKQTLTFSEFFLLKNNRNLICNKCQSLFKKIPNERCPRCSKANSKGICADCLKWEEKGIIVNHQSIFIYN
QAMKDYFSLYKFMGDYRLHEVFDSYFKNLSKKIPLVPIPVSPKRLQERGFNQVTAFLKDRAYLDLLEKEDTVRQSSLNRE
GRLSTSNPFKLKEGEKIPQKIILIDDIYTTGTTFYHAIKTLKKANPIEITTFSLCR
Nucleotide
Download Length: 651 bp
>NTDB_id=182932 LLJM1_RS06045 WP_032951095.1 1100111..1100761(-) (comFC) [Lactococcus cremoris strain JM1]
ATGCAAACTTGTCTGCTTTGTTCCAGAATTATCAAACAAACACTCACTTTTAGTGAATTCTTTTTACTAAAGAATAACAG
AAATTTAATATGCAATAAATGCCAATCACTGTTTAAAAAAATTCCTAACGAACGTTGTCCTCGTTGCTCTAAAGCTAACT
CTAAAGGTATATGTGCTGACTGTCTCAAGTGGGAAGAAAAAGGAATCATTGTTAATCATCAGTCAATTTTTATTTATAAC
CAAGCAATGAAGGATTACTTTAGTCTTTACAAATTTATGGGAGATTATCGATTACACGAAGTCTTCGATTCCTATTTTAA
AAATTTGTCCAAAAAAATTCCTCTGGTTCCCATTCCGGTTTCTCCTAAAAGATTACAAGAAAGAGGTTTTAACCAAGTAA
CAGCTTTTCTAAAAGATAGAGCTTATCTTGATTTGCTTGAAAAAGAGGATACTGTCAGACAATCAAGTCTTAATCGCGAG
GGACGTCTATCAACTAGCAATCCTTTTAAGTTGAAAGAGGGTGAAAAAATACCCCAAAAAATCATTTTGATTGATGATAT
TTATACAACTGGAACTACTTTTTATCATGCAATAAAAACCTTAAAGAAAGCTAATCCGATTGAAATTACAACTTTTTCAC
TCTGCCGTTAA
ATGCAAACTTGTCTGCTTTGTTCCAGAATTATCAAACAAACACTCACTTTTAGTGAATTCTTTTTACTAAAGAATAACAG
AAATTTAATATGCAATAAATGCCAATCACTGTTTAAAAAAATTCCTAACGAACGTTGTCCTCGTTGCTCTAAAGCTAACT
CTAAAGGTATATGTGCTGACTGTCTCAAGTGGGAAGAAAAAGGAATCATTGTTAATCATCAGTCAATTTTTATTTATAAC
CAAGCAATGAAGGATTACTTTAGTCTTTACAAATTTATGGGAGATTATCGATTACACGAAGTCTTCGATTCCTATTTTAA
AAATTTGTCCAAAAAAATTCCTCTGGTTCCCATTCCGGTTTCTCCTAAAAGATTACAAGAAAGAGGTTTTAACCAAGTAA
CAGCTTTTCTAAAAGATAGAGCTTATCTTGATTTGCTTGAAAAAGAGGATACTGTCAGACAATCAAGTCTTAATCGCGAG
GGACGTCTATCAACTAGCAATCCTTTTAAGTTGAAAGAGGGTGAAAAAATACCCCAAAAAATCATTTTGATTGATGATAT
TTATACAACTGGAACTACTTTTTATCATGCAATAAAAACCTTAAAGAAAGCTAATCCGATTGAAATTACAACTTTTTCAC
TCTGCCGTTAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comFC | Lactococcus lactis subsp. cremoris KW2 |
98.507 |
62.037 |
0.611 |
| comFC/cflB | Streptococcus mitis NCTC 12261 |
49.541 |
100 |
0.5 |
| comFC/cflB | Streptococcus pneumoniae Rx1 |
47.248 |
100 |
0.477 |
| comFC/cflB | Streptococcus pneumoniae D39 |
47.248 |
100 |
0.477 |
| comFC/cflB | Streptococcus pneumoniae R6 |
47.248 |
100 |
0.477 |
| comFC/cflB | Streptococcus pneumoniae TIGR4 |
47.248 |
100 |
0.477 |
| comFC/cflB | Streptococcus mitis SK321 |
47.248 |
100 |
0.477 |
| comFC | Bacillus subtilis subsp. subtilis str. 168 |
34.802 |
100 |
0.366 |