Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   AT729_RS05055 Genome accession   NZ_CP015886
Coordinates   885855..886316 (-) Length   153 a.a.
NCBI ID   WP_002216872.1    Uniprot ID   A0A2J1SH93
Organism   Neisseria meningitidis strain 38277     
Function   inhibition of RecA (predicted from homology)   
Competence regulation

Genomic Context

Location: 880855..891316
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AT729_RS05030 (AT729_00827) surE 882375..883121 (+) 747 WP_014581406.1 5'/3'-nucleotidase SurE -
  AT729_RS05040 (AT729_00828) - 883377..884624 (+) 1248 WP_002227172.1 M23 family metallopeptidase -
  AT729_RS05045 (AT729_00829) - 884985..885467 (-) 483 WP_002216871.1 acyl-CoA thioesterase -
  AT729_RS13295 (AT729_00830) - 885620..885781 (-) 162 WP_002237185.1 hypothetical protein -
  AT729_RS05055 (AT729_00831) recX 885855..886316 (-) 462 WP_002216872.1 recombination regulator RecX Regulator
  AT729_RS05060 (AT729_00832) - 886389..887099 (-) 711 WP_002226230.1 phosphoglycolate phosphatase -
  AT729_RS05070 (AT729_00833) - 887506..888774 (+) 1269 WP_079889460.1 Glu/Leu/Phe/Val family dehydrogenase -
  AT729_RS05075 (AT729_00834) - 888832..889638 (-) 807 WP_002212946.1 DUF4198 domain-containing protein -
  AT729_RS05080 (AT729_00835) - 889983..890192 (+) 210 WP_002212949.1 tautomerase family protein -

Sequence

Protein


Download         Length: 153 a.a.        Molecular weight: 17717.03 Da        Isoelectric Point: 10.0960

>NTDB_id=182780 AT729_RS05055 WP_002216872.1 885855..886316(-) (recX) [Neisseria meningitidis strain 38277]
MKPQKSLRARAMDILSRQEVSRIGLKRKLAPHAESEEELENVLNEFAERNWQSDLRYAEAYIRSKSRKHGSLRLKQALAQ
QGIDEETSRNLLPDRSSEKQAAIAVLRKKFKHPAADLKEKQKQARFLAYRGFDADTVQTALKHAWDENWEDGC

Nucleotide


Download         Length: 462 bp        

>NTDB_id=182780 AT729_RS05055 WP_002216872.1 885855..886316(-) (recX) [Neisseria meningitidis strain 38277]
ATGAAACCGCAAAAATCCCTACGCGCCCGCGCGATGGACATCCTCTCGCGCCAAGAAGTCAGCCGCATCGGTCTGAAACG
CAAACTTGCACCGCACGCCGAAAGCGAAGAGGAGTTGGAAAACGTGTTAAACGAATTTGCCGAACGCAACTGGCAGTCGG
ATTTGCGCTATGCCGAAGCCTATATCCGCAGCAAAAGCCGCAAACACGGTTCATTGAGGCTGAAACAGGCTTTGGCGCAA
CAGGGCATAGATGAAGAAACCAGCCGCAACCTGCTTCCCGACCGCTCAAGCGAAAAACAGGCCGCCATAGCCGTGTTGCG
TAAAAAATTCAAACACCCCGCCGCCGACCTCAAAGAAAAACAAAAACAGGCGCGTTTCCTCGCCTATCGCGGATTCGATG
CCGATACCGTTCAGACGGCATTGAAACACGCTTGGGACGAAAATTGGGAAGACGGCTGCTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(30-143)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2J1SH93

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Neisseria gonorrhoeae strain FA1090

98.039

100

0.98

Multiple sequence alignment