Detailed information NTG0182652

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: B2K12_RS05495
• Genome accession: NZ_CP019965
• Coordinates: 1071215..1072165 (+)
• Length: 316 a.a.
• NCBI ID: WP_002853794.1
• Uniprot ID: -
• Organism: Campylobacter jejuni strain NCTC12662
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1066215..1077165

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
B2K12_RS05470 (B2K12_05470)	-	1066280..1067167 (-)	888	WP_052803913.1	glycosyltransferase family 2 protein	-
B2K12_RS05475 (B2K12_05475)	-	1067160..1068368 (-)	1209	WP_044306107.1	glycosyltransferase family 2 protein	-
B2K12_RS08440	-	1068446..1068853 (-)	408	WP_052500184.1	hypothetical protein	-
B2K12_RS08445	-	1068883..1069413 (-)	531	WP_052500185.1	glycosyltransferase family 2 protein	-
B2K12_RS05485 (B2K12_05485)	-	1069406..1070293 (-)	888	WP_052803914.1	glycosyltransferase	-
B2K12_RS05490 (B2K12_05490)	waaV	1070347..1071156 (-)	810	WP_044306108.1	glycosyltransferase family 2 protein	-
B2K12_RS05495 (B2K12_05495)	waaF	1071215..1072165 (+)	951	WP_002853794.1	glycosyltransferase family 9 protein	Regulator
B2K12_RS05500 (B2K12_05500)	-	1072151..1072915 (-)	765	WP_044306109.1	glycosyltransferase family 25 protein	-
B2K12_RS05505 (B2K12_05505)	gmhA	1072915..1073475 (-)	561	WP_023890815.1	D-sedoheptulose 7-phosphate isomerase	-
B2K12_RS05510 (B2K12_05510)	rfaE1	1073472..1074857 (-)	1386	WP_044306110.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
B2K12_RS05515 (B2K12_05515)	rfaD	1074850..1075803 (-)	954	WP_044306111.1	ADP-glyceromanno-heptose 6-epimerase	-
B2K12_RS05520 (B2K12_05520)	gmhB	1075804..1076364 (-)	561	WP_002853963.1	D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase	-
B2K12_RS05525 (B2K12_05525)	-	1076446..1076748 (+)	303	WP_002852762.1	cytochrome c	-
B2K12_RS05530 (B2K12_05530)	ccoS	1076771..1076977 (-)	207	WP_002877126.1	cbb3-type cytochrome oxidase assembly protein CcoS	-

Sequence

Protein

• Length: 316 a.a.
• Molecular weight: 36225.73 Da
• Isoelectric Point: 10.2421

>NTDB_id=182652 B2K12_RS05495 WP_002853794.1 1071215..1072165(+) (waaF) [Campylobacter jejuni strain NCTC12662]
MKIFIHLPTWLGDAVMASPALYAIKEHFKNAQFILYGSLVSTALFKEFPNSKIIIENKQSRYKQALSLRKELGKIDFSFA
FRSAFSSKIILHILKTKQRYFFDKNKHKEEHQVLKYLYFIENSLSIKAHFKDLKLPFKLKFQNPLVLKNGKKILGLNPGA
SFGSAKRWDVSYFAKVALNFSQSHEILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHISAVYKVKTVAIFGPTKFTQTSPWQNENATLVHLDLACMPCMQKTCPLKHHKCMKDLKPEVIVKAIQNLTNI

Nucleotide

• Length: 951 bp

>NTDB_id=182652 B2K12_RS05495 WP_002853794.1 1071215..1072165(+) (waaF) [Campylobacter jejuni strain NCTC12662]
ATGAAAATTTTTATACACCTTCCCACTTGGCTAGGCGATGCAGTGATGGCTTCGCCTGCTTTATACGCTATAAAAGAACA
TTTTAAAAATGCTCAGTTTATCCTTTATGGATCTTTGGTTTCCACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACAATCTCGCTATAAACAAGCCCTATCTTTACGCAAAGAACTTGGCAAAATCGATTTTAGCTTTGCT
TTTAGGTCTGCGTTTTCTTCTAAGATTATCTTACATATTCTTAAAACAAAGCAAAGATATTTTTTTGACAAAAACAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACTCACTTAGTATAAAAGCTCATTTTAAAGACTTAA
AGCTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTGTCTTAAAAAATGGTAAAAAAATTCTAGGACTCAACCCTGGCGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGTGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGAGATTTT
AATCTTTGGTGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACTACCATCAAAACCCTTTGTCAAAATATTGCTTTTTGTGATCTTTTCATCACAAACGACAGT
GGACCTATGCACATAAGTGCGGTTTATAAGGTAAAAACCGTGGCTATTTTTGGCCCTACGAAATTTACTCAAACTTCACC
TTGGCAAAATGAAAATGCAACATTAGTGCATTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAACCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATTTAAAGCCTGAAGTGATTGTAAAAGCGATTCAAAATTTAACTAATATCTAA

Domains

Predicted by InterProScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (96-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	93.61	99.051	0.927