Detailed information
Bioinformatically predicted
Overview
| Name | luxS | Type | Regulator |
| Locus tag | A8140_RS13100 | Genome accession | NZ_CP015863 |
| Coordinates | 2747052..2747570 (-) | Length | 172 a.a. |
| NCBI ID | WP_005534061.1 | Uniprot ID | - |
| Organism | Vibrio campbellii CAIM 519 = NBRC 15631 = ATCC 25920 strain ATCC 25920 CAIM 519T | ||
| Function | induction of competence (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2742052..2752570
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A8140_RS13075 (A8140_12435) | rimM | 2742108..2742656 (-) | 549 | WP_005534055.1 | ribosome maturation factor RimM | - |
| A8140_RS13080 (A8140_12440) | rpsP | 2742684..2742932 (-) | 249 | WP_004410028.1 | 30S ribosomal protein S16 | - |
| A8140_RS13085 (A8140_12445) | ffh | 2743143..2744525 (-) | 1383 | WP_005462555.1 | signal recognition particle protein | - |
| A8140_RS13090 (A8140_12450) | - | 2744739..2745533 (+) | 795 | WP_005534057.1 | cytochrome C assembly family protein | - |
| A8140_RS13095 (A8140_12455) | - | 2745689..2746963 (+) | 1275 | WP_005534059.1 | HlyC/CorC family transporter | - |
| A8140_RS13100 (A8140_12460) | luxS | 2747052..2747570 (-) | 519 | WP_005534061.1 | S-ribosylhomocysteine lyase | Regulator |
| A8140_RS13105 (A8140_12465) | - | 2747660..2748265 (-) | 606 | WP_005534063.1 | hypothetical protein | - |
| A8140_RS13110 (A8140_12470) | gshA | 2748285..2749853 (-) | 1569 | WP_005534065.1 | glutamate--cysteine ligase | - |
Sequence
Protein
Download Length: 172 a.a. Molecular weight: 19087.83 Da Isoelectric Point: 4.6320
>NTDB_id=182597 A8140_RS13100 WP_005534061.1 2747052..2747570(-) (luxS) [Vibrio campbellii CAIM 519 = NBRC 15631 = ATCC 25920 strain ATCC 25920 CAIM 519T]
MPLLDSFTVDHTRMNAPAVRVAKTMQTPKGDTITVFDLRFTAPNKDILSEKGIHTLEHLYAGFMRNHLNGDSVEIIDISP
MGCRTGFYMSLIGTPSEQQVADAWIAAMEDVLKVEDQNKIPELNEYQCGTAAMHSLDEAKQIAKNILEAGVAVNKNDELA
LPESMLKELRID
MPLLDSFTVDHTRMNAPAVRVAKTMQTPKGDTITVFDLRFTAPNKDILSEKGIHTLEHLYAGFMRNHLNGDSVEIIDISP
MGCRTGFYMSLIGTPSEQQVADAWIAAMEDVLKVEDQNKIPELNEYQCGTAAMHSLDEAKQIAKNILEAGVAVNKNDELA
LPESMLKELRID
Nucleotide
Download Length: 519 bp
>NTDB_id=182597 A8140_RS13100 WP_005534061.1 2747052..2747570(-) (luxS) [Vibrio campbellii CAIM 519 = NBRC 15631 = ATCC 25920 strain ATCC 25920 CAIM 519T]
ATGCCTTTATTAGACAGCTTTACCGTAGACCACACGCGTATGAATGCACCAGCGGTTCGTGTGGCTAAAACGATGCAAAC
TCCAAAAGGAGACACCATCACGGTATTCGACCTACGTTTCACTGCTCCAAACAAAGACATCCTTTCTGAGAAAGGAATTC
ATACATTAGAGCACTTGTACGCAGGCTTTATGCGTAATCACCTAAATGGTGATAGCGTTGAGATAATTGATATCTCACCA
ATGGGTTGCCGTACTGGTTTCTACATGAGCTTGATTGGTACGCCTTCAGAGCAGCAAGTGGCTGACGCTTGGATTGCCGC
GATGGAAGACGTACTAAAAGTAGAAGACCAAAACAAGATCCCTGAGTTGAACGAATACCAATGTGGTACAGCAGCGATGC
ACTCTCTGGATGAAGCGAAGCAAATCGCGAAGAACATTCTAGAAGCGGGTGTGGCGGTGAATAAGAATGATGAATTGGCA
CTGCCAGAGTCAATGCTGAAAGAGCTACGTATCGACTAA
ATGCCTTTATTAGACAGCTTTACCGTAGACCACACGCGTATGAATGCACCAGCGGTTCGTGTGGCTAAAACGATGCAAAC
TCCAAAAGGAGACACCATCACGGTATTCGACCTACGTTTCACTGCTCCAAACAAAGACATCCTTTCTGAGAAAGGAATTC
ATACATTAGAGCACTTGTACGCAGGCTTTATGCGTAATCACCTAAATGGTGATAGCGTTGAGATAATTGATATCTCACCA
ATGGGTTGCCGTACTGGTTTCTACATGAGCTTGATTGGTACGCCTTCAGAGCAGCAAGTGGCTGACGCTTGGATTGCCGC
GATGGAAGACGTACTAAAAGTAGAAGACCAAAACAAGATCCCTGAGTTGAACGAATACCAATGTGGTACAGCAGCGATGC
ACTCTCTGGATGAAGCGAAGCAAATCGCGAAGAACATTCTAGAAGCGGGTGTGGCGGTGAATAAGAATGATGAATTGGCA
CTGCCAGAGTCAATGCTGAAAGAGCTACGTATCGACTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| luxS | Vibrio cholerae strain A1552 |
86.55 |
99.419 |
0.86 |