Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   A8L59_RS24865 Genome accession   NZ_CP015852
Coordinates   5546059..5546463 (-) Length   134 a.a.
NCBI ID   WP_007913673.1    Uniprot ID   -
Organism   Pseudomonas koreensis strain CRS05-R5     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 5541059..5551463
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A8L59_RS24850 (A8L59_24820) - 5542884..5544938 (-) 2055 WP_064589629.1 methyl-accepting chemotaxis protein -
  A8L59_RS24855 (A8L59_24825) - 5545083..5545622 (-) 540 WP_064589630.1 chemotaxis protein CheW -
  A8L59_RS24860 (A8L59_24830) pilH 5545633..5545998 (-) 366 WP_064590123.1 twitching motility response regulator PilH -
  A8L59_RS24865 (A8L59_24835) pilG 5546059..5546463 (-) 405 WP_007913673.1 twitching motility response regulator PilG Regulator
  A8L59_RS24870 (A8L59_24840) gshB 5546689..5547660 (+) 972 WP_064589631.1 glutathione synthase -
  A8L59_RS24875 (A8L59_24845) - 5547768..5548667 (+) 900 WP_064589632.1 energy transducer TonB -
  A8L59_RS24880 (A8L59_24850) - 5548880..5549452 (+) 573 WP_064589633.1 YqgE/AlgH family protein -
  A8L59_RS24885 (A8L59_24855) ruvX 5549452..5549889 (+) 438 WP_064589634.1 Holliday junction resolvase RuvX -
  A8L59_RS24890 (A8L59_24860) pyrR 5549970..5550476 (+) 507 WP_064589635.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -

Sequence

Protein


Download         Length: 134 a.a.        Molecular weight: 14592.99 Da        Isoelectric Point: 7.1346

>NTDB_id=182513 A8L59_RS24865 WP_007913673.1 5546059..5546463(-) (pilG) [Pseudomonas koreensis strain CRS05-R5]
MEQQSSALKVMVIDDSKTIRRTAETLLKNVGCEVITAIDGFDALAKIADNHPGIIFVDIMMPRLDGYQTCALIKNNSAFK
ATPVIMLSSRDGLFDKAKGRIVGSDQFLTKPFSKEELLNAIQAHVPGFAAVLPQ

Nucleotide


Download         Length: 405 bp        

>NTDB_id=182513 A8L59_RS24865 WP_007913673.1 5546059..5546463(-) (pilG) [Pseudomonas koreensis strain CRS05-R5]
ATGGAACAGCAGTCCAGCGCCTTGAAGGTCATGGTGATCGATGACTCGAAAACGATTCGTCGCACCGCCGAAACACTGTT
GAAGAATGTGGGCTGCGAAGTCATCACGGCCATCGATGGTTTCGACGCCTTGGCCAAGATCGCCGACAACCACCCCGGAA
TCATTTTTGTCGACATCATGATGCCGCGTCTGGATGGTTATCAGACCTGCGCTTTAATCAAGAACAACAGTGCCTTCAAG
GCCACGCCGGTGATCATGCTGTCGTCGCGTGACGGACTGTTCGACAAGGCCAAGGGGCGGATTGTCGGTTCTGATCAATT
TTTGACCAAGCCTTTCAGCAAGGAAGAACTGCTCAACGCGATTCAGGCCCACGTTCCGGGCTTCGCCGCCGTTTTGCCGC
AGTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

75.2

93.284

0.701

Multiple sequence alignment