Detailed information    

insolico Bioinformatically predicted

Overview

Name   luxS   Type   Regulator
Locus tag   AOZ05_RS12005 Genome accession   NZ_CP019945
Coordinates   2275452..2275922 (+) Length   156 a.a.
NCBI ID   WP_000164421.1    Uniprot ID   P65329
Organism   Staphylococcus aureus strain BA01611     
Function   induction of competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 2270452..2280922
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AOZ05_RS11985 ldmS 2271432..2272625 (-) 1194 WP_031590228.1 L-aspartate--L-methionine ligase LdmS -
  AOZ05_RS11990 - 2272625..2273809 (-) 1185 WP_001291497.1 M20 family metallopeptidase -
  AOZ05_RS11995 - 2274017..2275189 (-) 1173 WP_000195429.1 IS256-like element IS256 family transposase -
  AOZ05_RS12005 luxS 2275452..2275922 (+) 471 WP_000164421.1 S-ribosylhomocysteine lyase Regulator
  AOZ05_RS12010 - 2276074..2276424 (-) 351 WP_001024035.1 membrane protein -
  AOZ05_RS12015 - 2276438..2277739 (-) 1302 WP_001242319.1 pyrimidine-nucleoside phosphorylase -
  AOZ05_RS12025 deoC 2278018..2278680 (-) 663 WP_001083325.1 deoxyribose-phosphate aldolase -
  AOZ05_RS12030 deoD 2278995..2279705 (+) 711 WP_000160304.1 purine-nucleoside phosphorylase -
  AOZ05_RS12035 - 2279826..2280269 (-) 444 WP_000070866.1 Dps family protein -
  AOZ05_RS12040 - 2280469..2280882 (-) 414 WP_031590892.1 thiol-disulfide oxidoreductase DCC family protein -

Sequence

Protein


Download         Length: 156 a.a.        Molecular weight: 17513.76 Da        Isoelectric Point: 5.4567

>NTDB_id=182464 AOZ05_RS12005 WP_000164421.1 2275452..2275922(+) (luxS) [Staphylococcus aureus strain BA01611]
MTKMNVESFNLDHTKVVAPFIRLAGTMEGLNGDVIHKYDIRFKQPNKEHMDMPGLHSLEHLMAENIRNHSDKVVDLSPMG
CQTGFYVSFINHDNYDDVLNIVEATLNDVLNATEVPACNEVQCGWAASHSLEGAKTIAQAFLDKRNEWHDVFGTGK

Nucleotide


Download         Length: 471 bp        

>NTDB_id=182464 AOZ05_RS12005 WP_000164421.1 2275452..2275922(+) (luxS) [Staphylococcus aureus strain BA01611]
ATGACAAAAATGAATGTTGAAAGTTTCAATTTAGATCATACTAAAGTGGTTGCCCCATTTATTAGATTAGCGGGAACGAT
GGAAGGATTAAACGGAGATGTCATTCACAAATACGACATTCGTTTCAAACAACCAAACAAAGAACATATGGATATGCCAG
GACTACATTCATTAGAACATTTAATGGCTGAAAATATTAGGAATCATAGTGACAAAGTTGTTGATTTAAGTCCTATGGGT
TGCCAAACTGGTTTCTATGTATCATTTATTAATCATGATAATTATGATGATGTATTAAATATTGTTGAAGCAACTTTAAA
TGATGTGCTAAATGCTACTGAAGTGCCTGCTTGTAATGAAGTACAATGTGGCTGGGCAGCAAGTCATTCATTAGAAGGTG
CTAAAACTATCGCTCAAGCATTTCTAGACAAACGAAACGAATGGCATGATGTTTTCGGTACAGGAAAATAA

Domains

Predicted by InterProScan.

S-Ribosylhomocysteinase (LuxS) (LuxS)

(5-148)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB P65329

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  luxS Vibrio cholerae strain A1552

44.681

90.385

0.404