Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   AOZ05_RS03860 Genome accession   NZ_CP019945
Coordinates   748882..749556 (+) Length   224 a.a.
NCBI ID   WP_001166500.1    Uniprot ID   Q99VW2
Organism   Staphylococcus aureus strain BA01611     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 743882..754556
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AOZ05_RS03830 - 744097..745164 (+) 1068 WP_000980137.1 membrane protein -
  AOZ05_RS03835 - 745315..746358 (+) 1044 WP_001030771.1 alpha/beta hydrolase -
  AOZ05_RS03845 - 746687..747115 (+) 429 WP_000198504.1 hypothetical protein -
  AOZ05_RS03850 - 747324..747830 (-) 507 WP_000940129.1 GNAT family N-acetyltransferase -
  AOZ05_RS03855 graX 747943..748866 (+) 924 WP_054249646.1 auxiliary protein GraX/ApsX -
  AOZ05_RS03860 braR 748882..749556 (+) 675 WP_001166500.1 response regulator transcription factor GraR/ApsR Regulator
  AOZ05_RS03865 graS 749549..750589 (+) 1041 WP_001061247.1 histidine kinase GraS/ApsS -
  AOZ05_RS03870 vraF 750733..751494 (+) 762 WP_000985996.1 ABC transporter ATP-binding protein VraF -
  AOZ05_RS03875 vraG 751484..753373 (+) 1890 WP_031589022.1 ABC transporter permease VraG -

Sequence

Protein


Download         Length: 224 a.a.        Molecular weight: 26065.87 Da        Isoelectric Point: 4.3563

>NTDB_id=182394 AOZ05_RS03860 WP_001166500.1 748882..749556(+) (braR) [Staphylococcus aureus strain BA01611]
MQILLVEDDNTLFQELKKELEQWDFNVAGIEDFGKVMDTFESFNPEIVILDVQLPKYDGFYWCRKMREVSNVPILFLSSR
DNPMDQVMSMELGADDYMQKPFYTNVLIAKLQAIYRRVYEFTAEEKRTLTWQDAVVDLSKDSIQKGDDTIFLSKTEMIIL
EILITKKNQIVSRDTIITALWDDEAFVSDNTLTVNVNRLRKKLSEISMDSAIETKVGKGYMAHE

Nucleotide


Download         Length: 675 bp        

>NTDB_id=182394 AOZ05_RS03860 WP_001166500.1 748882..749556(+) (braR) [Staphylococcus aureus strain BA01611]
ATGCAAATACTACTAGTAGAAGATGACAATACTTTGTTTCAAGAATTGAAAAAAGAATTAGAACAATGGGATTTTAATGT
TGCTGGTATTGAAGATTTCGGCAAAGTAATGGATACATTTGAAAGTTTTAATCCTGAAATTGTTATATTGGATGTTCAAT
TACCTAAATATGATGGGTTTTATTGGTGCAGAAAAATGAGAGAAGTTTCCAACGTACCAATATTATTTTTATCATCTCGT
GATAATCCAATGGATCAAGTGATGAGTATGGAACTTGGCGCAGATGATTATATGCAAAAACCGTTCTATACCAATGTATT
AATTGCTAAATTACAAGCGATTTATCGTCGTGTCTATGAGTTTACAGCTGAAGAAAAACGTACATTGACTTGGCAAGATG
CTGTCGTTGATCTATCAAAAGATAGTATACAAAAAGGTGACGATACGATTTTTCTATCCAAAACAGAAATGATTATATTA
GAAATTCTTATTACCAAAAAAAATCAAATCGTTTCGAGAGATACAATTATCACTGCATTATGGGATGATGAAGCATTTGT
TAGTGATAATACGTTAACAGTAAATGTGAATCGTTTACGAAAAAAATTATCTGAAATAAGTATGGATAGTGCAATCGAAA
CAAAAGTAGGAAAAGGATATATGGCTCATGAATAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(149-221)

Response regulator receiver domain (Response_reg)

(3-111)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q99VW2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

40.455

98.214

0.397