Detailed information    

insolico Bioinformatically predicted

Overview


Name   braS   Type   Regulator
Locus tag   FORC39_RS14025 Genome accession   NZ_CP015817
Coordinates   2690386..2691273 (-) Length   295 a.a.
NCBI ID   WP_000143416.1    Uniprot ID   -
Organism   Staphylococcus aureus strain FORC_039     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 2685386..2696273
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FORC39_RS13990 - 2685412..2685495 (+) 84 WP_031797553.1 hypothetical protein -
  FORC39_RS13995 (FORC39_2468) - 2685603..2686100 (-) 498 WP_001065267.1 glutathione peroxidase -
  FORC39_RS14000 - 2686110..2686370 (-) 261 WP_001789910.1 hypothetical protein -
  FORC39_RS14010 - 2686752..2686865 (-) 114 WP_011447078.1 hypothetical protein -
  FORC39_RS14015 (FORC39_2469) - 2687526..2689526 (-) 2001 WP_000776738.1 ABC transporter permease -
  FORC39_RS14020 (FORC39_2470) - 2689523..2690278 (-) 756 WP_000923760.1 ABC transporter ATP-binding protein -
  FORC39_RS14025 (FORC39_2471) braS 2690386..2691273 (-) 888 WP_000143416.1 nisin susceptibility-associated two-component system sensor histidine kinase NsaS Regulator
  FORC39_RS14030 (FORC39_2472) braR 2691284..2691949 (-) 666 WP_000697886.1 nisin susceptibility-associated two-component system response regulator NsaR Regulator
  FORC39_RS14035 (FORC39_2473) - 2691975..2692175 (-) 201 WP_000604728.1 hypothetical protein -
  FORC39_RS14040 (FORC39_2474) - 2692373..2693797 (+) 1425 WP_086353437.1 alkaline phosphatase -
  FORC39_RS15025 - 2693857..2693958 (-) 102 WP_000731972.1 SE2200 family small protein -
  FORC39_RS14050 (FORC39_2475) - 2694080..2694535 (-) 456 WP_000106185.1 MarR family winged helix-turn-helix transcriptional regulator -
  FORC39_RS14055 (FORC39_2476) - 2694780..2695541 (-) 762 WP_000323456.1 alpha/beta hydrolase family protein -

Sequence


Protein


Download         Length: 295 a.a.        Molecular weight: 34020.27 Da        Isoelectric Point: 5.8482

>NTDB_id=182275 FORC39_RS14025 WP_000143416.1 2690386..2691273(-) (braS) [Staphylococcus aureus strain FORC_039]
MTFLKSITQEIAIVIVIFALFGLMFYLYHLPLEAYLLALGVILLLLLIFIGIKYLSFVKTISQQQQIENLENALYQLKNE
QIEYKNDVESYFLTWVHQMKTPITAAQLLLERDEPNVVNRVRQEVIQIDNYTSLALSYLKLLNETSDISVTKISINDIIR
PIIMKYSIQFIDQKTKIHYEPCHHEVLTDVRWTSLMIEQLINNALKYARGKDIWIEFDEQSNQLHVKDNGIGISEADLPK
IFDKGYSGYNGQRQSNSSGIGLFIVKQISTHTNHPVSVVSKQNEGTTFTIQFPDE

Nucleotide


Download         Length: 888 bp        

>NTDB_id=182275 FORC39_RS14025 WP_000143416.1 2690386..2691273(-) (braS) [Staphylococcus aureus strain FORC_039]
ATGACCTTTCTTAAAAGTATTACTCAGGAAATAGCAATAGTCATAGTTATTTTTGCTTTGTTTGGCTTAATGTTTTACCT
GTATCATTTGCCATTAGAAGCATATTTACTAGCACTTGGCGTTATTTTATTATTATTACTCATATTCATAGGTATTAAAT
ATTTAAGTTTTGTAAAAACTATAAGCCAACAACAACAAATTGAAAACTTAGAAAATGCGTTGTATCAGCTTAAAAATGAA
CAAATTGAATATAAAAATGATGTAGAGAGCTACTTTTTAACATGGGTACATCAAATGAAAACACCCATTACTGCAGCACA
ACTGTTACTTGAAAGAGATGAGCCTAATGTTGTTAATCGTGTTCGTCAAGAGGTTATTCAAATTGATAACTATACAAGTT
TAGCACTTAGTTATTTAAAGTTATTAAATGAAACTTCTGATATTTCTGTCACTAAAATTTCGATTAATGATATCATTCGC
CCAATTATTATGAAATATTCAATACAGTTTATTGATCAAAAAACAAAAATCCATTATGAACCTTGTCATCACGAAGTATT
AACTGACGTTAGATGGACCTCTTTAATGATAGAACAATTAATAAATAATGCACTTAAGTATGCGAGAGGTAAAGATATAT
GGATTGAATTTGATGAGCAATCCAATCAATTACACGTAAAAGATAATGGTATCGGTATTAGTGAAGCGGACTTGCCTAAA
ATATTTGATAAGGGCTATTCAGGTTATAATGGCCAGCGCCAAAGTAACTCAAGTGGGATTGGTTTATTTATCGTAAAACA
AATTTCAACACACACAAACCATCCTGTTTCAGTCGTATCTAAACAAAATGAGGGTACAACATTTACGATTCAATTTCCAG
ATGAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braS Staphylococcus aureus N315

99.322

100

0.993


Multiple sequence alignment