Detailed information NTG0182148

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: B1200_RS06935
• Genome accession: NZ_CP019903
• Coordinates: 1324811..1325836 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain MDR_56
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 1319811..1330836

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
B1200_RS06905 (B1200_07075)	zapB	1319895..1320140 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
B1200_RS06910 (B1200_07080)	rraA	1320225..1320710 (-)	486	WP_000872909.1	ribonuclease E activity regulator RraA	-
B1200_RS06915 (B1200_07085)	menA	1320803..1321729 (-)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
B1200_RS06920 (B1200_07090)	hslU	1321796..1323127 (-)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
B1200_RS06925 (B1200_07095)	hslV	1323137..1323667 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
B1200_RS06930 (B1200_07100)	ftsN	1323760..1324719 (-)	960	WP_000068818.1	cell division protein FtsN	-
B1200_RS06935 (B1200_07105)	cytR	1324811..1325836 (-)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
B1200_RS06940 (B1200_07110)	priA	1325992..1328190 (-)	2199	WP_001318166.1	primosomal protein N'	Machinery gene
B1200_RS06945 (B1200_07115)	rpmE	1328393..1328605 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
B1200_RS06950 (B1200_07120)	yiiX	1328666..1329274 (-)	609	WP_000702299.1	YiiX family permuted papain-like enzyme	-
B1200_RS06955 (B1200_07125)	metJ	1329334..1329651 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=182148 B1200_RS06935 WP_000644904.1 1324811..1325836(-) (cytR) [Escherichia coli strain MDR_56]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=182148 B1200_RS06935 WP_000644904.1 1324811..1325836(-) (cytR) [Escherichia coli strain MDR_56]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACTATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTCCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCTGGAAGCAAAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGTGATGTGATGGCGCTCGGCGCACTTTCGCAGGCAAAACGCCA
GGGGCTAAAAGTACCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628