Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   STRMOE7_RS28265 Genome accession   NZ_CP019779
Coordinates   6368770..6369570 (-) Length   266 a.a.
NCBI ID   WP_033267374.1    Uniprot ID   -
Organism   Streptomyces sp. MOE7     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 6363770..6374570
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  STRMOE7_RS28250 (STRMOE7_28240) - 6364075..6364749 (+) 675 WP_084774305.1 GNAT family N-acetyltransferase -
  STRMOE7_RS28255 (STRMOE7_28245) - 6364855..6366621 (+) 1767 WP_084774307.1 IucA/IucC family protein -
  STRMOE7_RS28260 (STRMOE7_28250) - 6366663..6368681 (+) 2019 WP_084774309.1 ATP-dependent DNA helicase -
  STRMOE7_RS28265 (STRMOE7_28255) dinR/lexA 6368770..6369570 (-) 801 WP_033267374.1 transcriptional repressor LexA Regulator
  STRMOE7_RS28270 (STRMOE7_28260) nrdR 6370114..6370644 (+) 531 WP_033267373.1 transcriptional regulator NrdR -
  STRMOE7_RS28275 (STRMOE7_28265) - 6370770..6373649 (+) 2880 WP_033267372.1 vitamin B12-dependent ribonucleotide reductase -

Sequence

Protein


Download         Length: 266 a.a.        Molecular weight: 28857.54 Da        Isoelectric Point: 7.0667

>NTDB_id=181981 STRMOE7_RS28265 WP_033267374.1 6368770..6369570(-) (dinR/lexA) [Streptomyces sp. MOE7]
MTTTADSATITAQSHSQSRFDHPQKAQRPPMDDATSDSEEQKPARSLPGRPPGIRADSSGLTDRQRRVIEVIRDSVQRRG
YPPSMREIGQAVGLSSTSSVAHQLMALERKGFLRRDPHRPRAYEVRGSDQPTTAATDTAGKPAASYVPLVGRIAAGGPIL
AEESVEDVFPLPRQLVGDGELFVLKVVGDSMIEAAICDGDWVTVRRQPVAENGDIVAAMLDGEATVKRFKREDGHVWLLP
HNSAYQPIPGDEATILGKVVAVLRRV

Nucleotide


Download         Length: 801 bp        

>NTDB_id=181981 STRMOE7_RS28265 WP_033267374.1 6368770..6369570(-) (dinR/lexA) [Streptomyces sp. MOE7]
GTGACCACCACCGCAGACAGCGCGACCATCACCGCACAAAGCCACTCCCAGAGCCGATTCGATCATCCGCAGAAGGCACA
GCGGCCGCCGATGGACGACGCCACGTCGGACTCCGAAGAGCAGAAGCCCGCCCGCTCGCTCCCCGGTCGGCCACCAGGGA
TCCGGGCCGACAGCTCGGGGCTCACCGACCGCCAGCGCAGGGTGATCGAGGTCATCAGGGATTCGGTGCAGCGGCGCGGG
TACCCGCCGTCCATGCGGGAGATCGGCCAGGCCGTCGGACTGTCCAGCACCTCGTCCGTCGCCCATCAGCTCATGGCTCT
GGAGCGCAAGGGCTTCCTGCGCCGCGACCCGCACCGCCCCCGGGCGTACGAGGTCCGCGGCTCCGACCAGCCGACGACCG
CGGCGACCGACACCGCCGGCAAGCCCGCGGCGTCCTACGTCCCGCTGGTCGGCCGGATCGCCGCCGGTGGCCCGATCCTC
GCGGAGGAGTCCGTCGAGGACGTCTTCCCGCTCCCTCGCCAGCTCGTCGGCGACGGGGAACTGTTCGTACTGAAGGTCGT
CGGCGACTCCATGATCGAGGCCGCCATCTGCGACGGTGACTGGGTCACGGTCCGCCGCCAGCCGGTGGCCGAGAACGGCG
ACATCGTCGCCGCCATGCTGGACGGCGAGGCCACCGTCAAGCGCTTCAAGCGCGAGGACGGCCATGTGTGGCTGCTGCCG
CACAACTCCGCGTACCAGCCGATCCCCGGTGACGAGGCGACCATCCTCGGCAAGGTGGTGGCGGTGCTGCGGCGGGTCTG
A

Domains

Predicted by InterProScan.

Peptidase S24-like (Peptidase_S24)

(148-260)

LexA DNA binding domain (LexA_DNA_bind)

(59-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

45.755

79.699

0.365