Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   A7321_RS22755 Genome accession   NZ_CP015753
Coordinates   4630972..4631568 (+) Length   198 a.a.
NCBI ID   WP_004179217.1    Uniprot ID   A0A085DH59
Organism   Klebsiella pneumoniae strain W14     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 4625972..4636568
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A7321_RS22730 (A7321_22730) - 4626163..4627920 (-) 1758 WP_004147851.1 Lon protease family protein -
  A7321_RS22735 (A7321_22735) matP 4628106..4628558 (+) 453 WP_002898404.1 macrodomain Ter protein MatP -
  A7321_RS22740 (A7321_22740) ompA 4628691..4629761 (-) 1071 WP_002898408.1 porin OmpA -
  A7321_RS22745 (A7321_22745) sulA 4630114..4630623 (-) 510 WP_004179215.1 SOS-induced cell division inhibitor SulA -
  A7321_RS22750 (A7321_22750) - 4630666..4630881 (-) 216 WP_009485781.1 hypothetical protein -
  A7321_RS22755 (A7321_22755) sxy/tfoX 4630972..4631568 (+) 597 WP_004179217.1 TfoX/Sxy family DNA transformation protein Regulator
  A7321_RS22760 (A7321_22760) yccS 4631582..4633717 (-) 2136 WP_002898422.1 YccS family putative transporter -
  A7321_RS22765 (A7321_22765) - 4633735..4634181 (-) 447 WP_002898425.1 YccF domain-containing protein -
  A7321_RS22770 (A7321_22770) helD 4634306..4636360 (+) 2055 WP_004179218.1 DNA helicase IV -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 22516.11 Da        Isoelectric Point: 10.0350

>NTDB_id=181966 A7321_RS22755 WP_004179217.1 4630972..4631568(+) (sxy/tfoX) [Klebsiella pneumoniae strain W14]
MRKLVCPRLPQFQACVSPLGQLHTRPLFGGYSLAIDDTVFAMVAEGNIYLKACEQSAAYRVEHRNPLLTLRRHGRIVPLK
YYQIDDTLWRDEQQLFRLSLLSWQSAQREKNCRRASGRLKDLPNISFHMELQLIHAGIPDVRTLREVGAQEAWLRLRVNN
ASLSLSVLLALEGAIAGVHAAALPTPRRQELLEWAATR

Nucleotide


Download         Length: 597 bp        

>NTDB_id=181966 A7321_RS22755 WP_004179217.1 4630972..4631568(+) (sxy/tfoX) [Klebsiella pneumoniae strain W14]
ATGAGAAAACTAGTTTGTCCGCGGCTCCCGCAATTTCAGGCCTGCGTCTCACCGCTGGGTCAACTGCATACTCGTCCGCT
CTTTGGCGGCTACAGCCTGGCTATTGATGATACGGTGTTTGCGATGGTGGCCGAGGGAAACATTTATCTGAAGGCCTGCG
AGCAGAGCGCTGCTTATCGGGTGGAACATCGTAATCCTCTGTTAACGCTGCGCCGACACGGCCGCATAGTGCCGCTGAAG
TATTATCAAATTGACGACACTTTATGGCGCGATGAGCAGCAGCTTTTTCGGCTATCGCTACTGTCGTGGCAGAGTGCGCA
GCGCGAAAAGAACTGCCGACGGGCGTCGGGCCGCCTGAAGGATTTACCCAATATCAGCTTTCATATGGAATTGCAGCTGA
TTCACGCGGGCATACCGGACGTTAGGACGTTGCGGGAAGTTGGTGCGCAGGAGGCATGGCTGAGGCTACGCGTAAATAAT
GCTTCTTTATCGCTGAGCGTATTGCTGGCGCTGGAGGGGGCGATTGCCGGGGTACATGCCGCCGCGCTCCCGACGCCACG
GCGTCAGGAGCTTCTCGAATGGGCGGCCACCCGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(117-194)

TfoX N-terminal domain (TfoX_N)

(16-105)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A085DH59

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

51.269

99.495

0.51

Multiple sequence alignment