Detailed information    

insolico Bioinformatically predicted

Overview

Name   nucA/comI   Type   Machinery gene
Locus tag   DA68_RS16100 Genome accession   NZ_CP015727
Coordinates   3287185..3287619 (-) Length   144 a.a.
NCBI ID   WP_025966309.1    Uniprot ID   -
Organism   Bacillus cereus strain A1     
Function   cleavage of dsDNA into ssDNA (predicted from homology)   
DNA processing

Genomic Context

Location: 3282185..3292619
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DA68_RS16085 (DA68_16085) - 3283363..3283920 (+) 558 WP_000062063.1 PadR family transcriptional regulator -
  DA68_RS16090 (DA68_16090) metE 3284432..3286720 (+) 2289 WP_025966308.1 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase -
  DA68_RS16095 (DA68_16095) comJ 3286759..3287148 (-) 390 WP_000424030.1 competence protein ComJ -
  DA68_RS16100 (DA68_16100) nucA/comI 3287185..3287619 (-) 435 WP_025966309.1 DNA-entry nuclease Machinery gene
  DA68_RS16105 (DA68_16105) - 3287846..3288595 (+) 750 WP_000388476.1 DUF3967 domain-containing protein -
  DA68_RS16110 (DA68_16110) kinB 3288634..3289908 (-) 1275 WP_000420368.1 sporulation sensor histidine kinase KinB -
  DA68_RS16115 (DA68_16115) - 3290220..3290420 (+) 201 WP_000929286.1 hypothetical protein -
  DA68_RS16120 (DA68_16120) - 3290542..3291705 (+) 1164 WP_000434583.1 aminotransferase A -

Sequence

Protein


Download         Length: 144 a.a.        Molecular weight: 16024.41 Da        Isoelectric Point: 8.4331

>NTDB_id=181832 DA68_RS16100 WP_025966309.1 3287185..3287619(-) (nucA/comI) [Bacillus cereus strain A1]
MKQLKGIIISIIAILSILVAVYEVLVPEEASVKKTNTYDQVLEFPKERYPETGKHITDAIKEGHSEVCTIDRGGAADRRK
LSLAPYPSKKGYDRDEWPMAMCKEGGKGAHIEYISPADNRGAGSWVGNKLDKYPDGTRVKFEVK

Nucleotide


Download         Length: 435 bp        

>NTDB_id=181832 DA68_RS16100 WP_025966309.1 3287185..3287619(-) (nucA/comI) [Bacillus cereus strain A1]
ATGAAGCAATTAAAAGGTATTATCATTTCAATTATCGCAATTCTGTCTATTTTAGTAGCAGTTTATGAAGTACTTGTGCC
AGAGGAAGCAAGTGTAAAGAAAACGAATACGTATGATCAAGTGTTAGAATTTCCGAAAGAACGTTATCCAGAGACAGGAA
AACATATTACGGATGCTATAAAAGAAGGGCATTCAGAAGTTTGTACAATCGATCGTGGTGGTGCTGCAGATAGAAGGAAA
TTGTCGTTAGCACCATATCCATCAAAAAAAGGGTATGATCGCGATGAATGGCCAATGGCGATGTGCAAGGAAGGCGGAAA
AGGAGCACATATTGAATATATAAGTCCGGCGGATAACCGCGGAGCAGGCTCTTGGGTAGGGAATAAGTTAGATAAATACC
CAGATGGTACGCGAGTAAAATTTGAAGTGAAGTAG

Domains

Predicted by InterproScan.

Deoxyribonuclease NucA/NucB (DNase_NucA_NucB)

(48-140)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nucA/comI Bacillus subtilis subsp. subtilis str. 168

69.912

78.472

0.549

Multiple sequence alignment