Detailed information NTG0181822

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: B0908_RS22500
• Genome accession: NZ_CP019777
• Coordinates: 4371134..4372159 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli NU14
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4366134..4377159

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
B0908_RS22470 (B0908_22470)	zapB	4366218..4366463 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
B0908_RS22475 (B0908_22475)	rraA	4366548..4367033 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
B0908_RS22480 (B0908_22480)	menA	4367126..4368052 (-)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
B0908_RS22485 (B0908_22485)	hslU	4368119..4369450 (-)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
B0908_RS22490 (B0908_22490)	hslV	4369460..4369990 (-)	531	WP_000208235.1	ATP-dependent protease subunit HslV	-
B0908_RS22495 (B0908_22495)	ftsN	4370083..4371042 (-)	960	WP_000068834.1	cell division protein FtsN	-
B0908_RS22500 (B0908_22500)	cytR	4371134..4372159 (-)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
B0908_RS22505 (B0908_22505)	priA	4372315..4374513 (-)	2199	WP_001350873.1	primosomal protein N'	Machinery gene
B0908_RS22510 (B0908_22510)	rpmE	4374716..4374928 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
B0908_RS22515 (B0908_22515)	yiiX	4374989..4375597 (-)	609	WP_000702319.1	YiiX family permuted papain-like enzyme	-
B0908_RS22520 (B0908_22520)	metJ	4375657..4375974 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=181822 B0908_RS22500 WP_000644904.1 4371134..4372159(-) (cytR) [Escherichia coli NU14]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=181822 B0908_RS22500 WP_000644904.1 4371134..4372159(-) (cytR) [Escherichia coli NU14]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACTCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCACAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACTATTCTGGTGATTGTCCCGGATATCTGCGACCCT
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTACCTACAGTTCATATAGACAATCTGACCGCCGCATTTGATGCAGTAAATTATCTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCTGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGTTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628