Detailed information    

insolico Bioinformatically predicted

Overview


Name   dprA   Type   Machinery gene
Locus tag   AsACE_RS13690 Genome accession   NZ_CP015615
Coordinates   2828898..2830037 (+) Length   379 a.a.
NCBI ID   WP_076754612.1    Uniprot ID   -
Organism   Acinetobacter schindleri strain ACE     
Function   ssDNA binding; loading RecA onto ssDNA (predicted from homology)   
DNA processing

Genomic Context


Location: 2823898..2835037
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AsACE_RS13670 (AsACE_CH02721) - 2824401..2826416 (-) 2016 WP_076754606.1 TonB-dependent copper receptor -
  AsACE_RS13675 (AsACE_CH02722) - 2826488..2826907 (-) 420 WP_076754608.1 DUF2946 family protein -
  AsACE_RS13680 (AsACE_CH02723) def 2827000..2827530 (-) 531 WP_005220256.1 peptide deformylase -
  AsACE_RS13685 (AsACE_CH02724) tsaP 2827651..2828805 (+) 1155 WP_076754610.1 LysM peptidoglycan-binding domain-containing protein Machinery gene
  AsACE_RS13690 (AsACE_CH02725) dprA 2828898..2830037 (+) 1140 WP_076754612.1 DNA-processing protein DprA Machinery gene
  AsACE_RS13695 (AsACE_CH02726) - 2830078..2830653 (+) 576 WP_004895281.1 L-threonylcarbamoyladenylate synthase -
  AsACE_RS13705 (AsACE_CH02727) - 2831050..2831961 (-) 912 WP_076754617.1 DMT family transporter -
  AsACE_RS13710 (AsACE_CH02728) - 2832185..2832730 (+) 546 WP_076754619.1 glutathione peroxidase -
  AsACE_RS13715 (AsACE_CH02729) - 2832944..2833324 (+) 381 WP_076754621.1 RcnB family protein -
  AsACE_RS13720 (AsACE_CH02730) - 2833485..2834093 (+) 609 WP_076754947.1 hypothetical protein -

Sequence


Protein


Download         Length: 379 a.a.        Molecular weight: 42440.13 Da        Isoelectric Point: 6.1825

>NTDB_id=181546 AsACE_RS13690 WP_076754612.1 2828898..2830037(+) (dprA) [Acinetobacter schindleri strain ACE]
MLNSLSTTQLDNIRLWYVVQHSLTSFYRLSEYYENLADAVQPDQVETWLKLGVHKNHLQRLQDFNCKDSQREFQFCLEQI
QKTCDFILLHNEADYPQQLSHYADKPPIVFGQGKADSLLQAQVAIVGSRKPSNHGRQMAYDFAYYLSEQGFYINSGLAQG
IDEAAHRAALQQHRTIAVMGTGLDQTYPATSQPLKEQIIAQGGTVITEFLPGTPPLQHHFPRRNRIVSGLSLGVIVAEAA
LKSGSLITAKLAAEQGKTVFAIPGHIYSENHKGCHQLIREGAILIDHPHQVVEDLALATQWQAAEQIYKAENSEPELIEI
PAHLIPLYNQLDWIGQGLDQISIQLSQDVSTITAQLMELELLGFSTQQAGMFLRCRTGK

Nucleotide


Download         Length: 1140 bp        

>NTDB_id=181546 AsACE_RS13690 WP_076754612.1 2828898..2830037(+) (dprA) [Acinetobacter schindleri strain ACE]
ATGTTGAATTCGTTATCTACGACTCAACTGGACAACATTCGCTTATGGTATGTAGTCCAGCATTCCCTCACCAGTTTCTA
TCGCTTATCTGAATATTATGAAAATCTTGCTGATGCTGTTCAGCCGGATCAAGTTGAGACCTGGCTAAAACTAGGCGTTC
ATAAAAATCATCTCCAGCGGCTTCAGGATTTCAATTGCAAAGATTCCCAGCGCGAGTTTCAGTTTTGTCTGGAGCAGATC
CAGAAAACTTGCGACTTTATTTTATTACATAATGAAGCGGACTATCCTCAGCAACTGAGTCATTACGCCGATAAACCGCC
GATTGTATTTGGTCAGGGTAAAGCCGACAGTTTATTACAGGCACAGGTGGCAATTGTGGGCAGCCGCAAACCGAGCAATC
ACGGTCGTCAGATGGCTTATGATTTTGCTTACTACTTAAGTGAACAAGGTTTTTATATCAATAGTGGACTGGCGCAAGGC
ATTGATGAAGCGGCACATCGGGCAGCGCTGCAGCAGCATCGTACGATTGCAGTGATGGGCACGGGTCTGGATCAAACCTA
TCCGGCGACAAGTCAGCCATTAAAAGAACAGATCATTGCCCAAGGCGGCACGGTGATTACAGAATTTTTGCCCGGTACTC
CGCCTCTGCAACATCATTTTCCACGGCGTAACCGTATTGTAAGTGGACTGAGTCTGGGTGTTATTGTGGCTGAAGCTGCC
CTTAAAAGTGGCTCACTCATCACTGCCAAACTGGCTGCCGAACAAGGAAAAACCGTGTTTGCGATTCCCGGACATATCTA
CAGTGAAAATCACAAAGGCTGTCACCAGCTCATCCGCGAAGGTGCAATTCTGATTGATCATCCACACCAGGTGGTTGAAG
ATCTGGCATTAGCCACCCAATGGCAGGCAGCTGAACAAATTTACAAAGCAGAAAATAGTGAACCCGAATTGATCGAGATT
CCAGCACACCTGATTCCGCTCTACAACCAGCTCGACTGGATCGGACAAGGCCTAGATCAGATCAGCATTCAACTCAGCCA
GGATGTTTCCACAATCACAGCACAGTTGATGGAACTGGAATTACTCGGTTTCAGTACACAACAAGCCGGTATGTTTCTAC
GTTGTCGTACAGGCAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dprA Acinetobacter baumannii strain A118

60.477

99.472

0.602

  dprA Acinetobacter baumannii D1279779

60.212

99.472

0.599

  dprA Acinetobacter baylyi ADP1

56.955

100

0.573


Multiple sequence alignment