Detailed information    

insolico Bioinformatically predicted

Overview


Name   braR   Type   Regulator
Locus tag   BZK09_RS03980 Genome accession   NZ_CP019595
Coordinates   780765..781439 (+) Length   224 a.a.
NCBI ID   WP_001166506.1    Uniprot ID   -
Organism   Staphylococcus aureus strain GD1677     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 775765..786439
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BZK09_RS03950 (BZK09_03930) - 775980..777047 (+) 1068 WP_000980142.1 membrane protein -
  BZK09_RS03955 (BZK09_03935) - 777198..778241 (+) 1044 WP_001030759.1 alpha/beta hydrolase -
  BZK09_RS03965 (BZK09_03945) - 778571..778999 (+) 429 WP_000198503.1 hypothetical protein -
  BZK09_RS03970 (BZK09_03950) - 779207..779713 (-) 507 WP_000940129.1 GNAT family N-acetyltransferase -
  BZK09_RS03975 (BZK09_03955) graX 779826..780749 (+) 924 WP_000802948.1 auxiliary protein GraX/ApsX -
  BZK09_RS03980 (BZK09_03960) braR 780765..781439 (+) 675 WP_001166506.1 response regulator transcription factor GraR/ApsR Regulator
  BZK09_RS03985 (BZK09_03965) graS 781432..782472 (+) 1041 WP_001061267.1 histidine kinase GraS/ApsS -
  BZK09_RS03990 (BZK09_03970) vraF 782619..783380 (+) 762 WP_000153733.1 ABC transporter ATP-binding protein VraF -
  BZK09_RS03995 (BZK09_03975) - 783370..785259 (+) 1890 WP_000009400.1 ABC transporter permease -

Sequence


Protein


Download         Length: 224 a.a.        Molecular weight: 26062.92 Da        Isoelectric Point: 4.4019

>NTDB_id=181546 BZK09_RS03980 WP_001166506.1 780765..781439(+) (braR) [Staphylococcus aureus strain GD1677]
MQILLVEDDNTLFQELKKELEQWDFNVAGIEDFGKVMDTFESFNPEIVILDVQLPKYDGFYWCRKMREVSNVPILFLSSR
DNPMDQVMSMELGADDYMQKPFYTNVLIAKLQAIYRRVYEFTAEEKRTLTWQDAVVDLSKDSIQKGEQTIFLSKTEMIIL
EILITKKNQIVSRDTIITALWDDEAFVSDNTLTVNVNRLRKKLSEIGMDSAIETKVGKGYMAHE

Nucleotide


Download         Length: 675 bp        

>NTDB_id=181546 BZK09_RS03980 WP_001166506.1 780765..781439(+) (braR) [Staphylococcus aureus strain GD1677]
ATGCAAATACTACTAGTAGAAGATGACAATACTTTGTTTCAAGAATTGAAAAAAGAATTAGAACAATGGGATTTTAATGT
TGCTGGTATTGAAGATTTCGGCAAAGTAATGGATACATTTGAAAGTTTTAATCCTGAAATTGTTATATTGGATGTTCAAT
TACCTAAATATGATGGGTTTTATTGGTGCAGAAAAATGAGAGAAGTTTCCAACGTACCAATATTATTTTTATCATCTCGT
GATAATCCAATGGATCAAGTGATGAGTATGGAACTTGGCGCAGATGATTATATGCAAAAGCCTTTTTATACAAATGTATT
AATTGCTAAATTACAAGCGATTTATCGACGAGTGTATGAATTTACTGCTGAAGAAAAACGTACATTGACTTGGCAAGATG
CTGTCGTTGATCTATCAAAAGATAGTATACAAAAAGGTGAACAGACGATTTTTCTATCCAAAACAGAAATGATTATATTA
GAAATTCTTATTACTAAAAAAAATCAAATCGTTTCGAGAGATACAATTATTACTGCGCTATGGGATGATGAAGCATTTGT
CAGTGATAACACATTAACAGTTAATGTGAACCGATTACGTAAGAAACTATCTGAAATAGGGATGGACAGCGCAATTGAAA
CAAAAGTAGGAAAAGGATATATGGCACATGAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

41.818

98.214

0.411


Multiple sequence alignment