Detailed information    

insolico Bioinformatically predicted

Overview

Name   tonB2   Type   Machinery gene
Locus tag   AsACE_RS12270 Genome accession   NZ_CP015615
Coordinates   2549592..2550455 (-) Length   287 a.a.
NCBI ID   WP_213033854.1    Uniprot ID   -
Organism   Acinetobacter schindleri strain ACE     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2544592..2555455
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AsACE_RS12245 (AsACE_CH02438) miaB 2545644..2547101 (+) 1458 WP_076754323.1 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB -
  AsACE_RS12250 (AsACE_CH02439) - 2547141..2548217 (+) 1077 WP_048881843.1 PhoH family protein -
  AsACE_RS12255 (AsACE_CH02440) ybeY 2548240..2548722 (+) 483 WP_004809720.1 rRNA maturation RNase YbeY -
  AsACE_RS12260 (AsACE_CH02441) - 2548866..2549264 (+) 399 WP_076754325.1 hypothetical protein -
  AsACE_RS12265 (AsACE_CH02442) - 2549296..2549595 (+) 300 WP_076754327.1 antibiotic biosynthesis monooxygenase family protein -
  AsACE_RS12270 (AsACE_CH02443) tonB2 2549592..2550455 (-) 864 WP_213033854.1 energy transducer TonB Machinery gene
  AsACE_RS12275 (AsACE_CH02444) - 2550723..2551412 (+) 690 WP_076754331.1 hypothetical protein -
  AsACE_RS12280 (AsACE_CH02445) - 2551568..2552281 (+) 714 WP_076754333.1 DUF3108 domain-containing protein -
  AsACE_RS12285 (AsACE_CH02446) - 2552372..2552947 (+) 576 WP_004809732.1 xanthine phosphoribosyltransferase -
  AsACE_RS12290 (AsACE_CH02447) - 2553209..2553886 (-) 678 WP_004809734.1 hypothetical protein -
  AsACE_RS12295 (AsACE_CH02448) - 2553970..2555172 (-) 1203 WP_004896089.1 CsgG/HfaB family protein -

Sequence

Protein


Download         Length: 287 a.a.        Molecular weight: 32760.30 Da        Isoelectric Point: 9.2489

>NTDB_id=181530 AsACE_RS12270 WP_213033854.1 2549592..2550455(-) (tonB2) [Acinetobacter schindleri strain ACE]
MPLVKSWWKDPIFSSAVGIAALLHIMILMLQFGMPSEQDTSTKEIAVSLRVSNDKIEHADFLAQTDQQGSGQFREAHRMS
SDAPLPMPDQTAGKEAMLQNSQDMLQQKQELSFEEKVLMTTLSWQKQAEENQRKKRQEELNSQFQAKAAMVASLEAQYTQ
RQKNFSRQQKIKTVDGIQAKQDVSAAYLEKFRQKVEFYGNRFYPESARIQRLAGDVRLMVILNQNGGIRAIRLLESSGHT
VLDEAARTSLRKAAPFGAFDANMKDISELRIIRTWRFDPAEAEFEVR

Nucleotide


Download         Length: 864 bp        

>NTDB_id=181530 AsACE_RS12270 WP_213033854.1 2549592..2550455(-) (tonB2) [Acinetobacter schindleri strain ACE]
ATGCCTTTGGTTAAATCATGGTGGAAAGATCCAATTTTTAGCAGTGCTGTAGGGATTGCTGCATTATTACATATCATGAT
TTTAATGCTGCAGTTTGGAATGCCATCGGAACAGGATACTTCGACCAAGGAAATTGCAGTTAGCCTGCGCGTCAGTAATG
ACAAAATCGAGCATGCCGATTTTCTTGCCCAGACAGATCAGCAAGGTTCCGGTCAGTTCCGTGAAGCGCATCGTATGTCC
AGTGATGCTCCATTGCCGATGCCAGATCAGACAGCTGGAAAAGAAGCAATGCTTCAAAACAGCCAAGATATGCTGCAACA
AAAACAAGAGTTGAGCTTTGAAGAAAAAGTTCTGATGACAACCCTAAGCTGGCAGAAACAGGCAGAAGAAAATCAGCGCA
AGAAACGTCAGGAAGAACTCAACAGCCAGTTTCAAGCCAAAGCTGCTATGGTCGCGAGTCTGGAAGCTCAATATACGCAG
CGCCAGAAAAACTTTAGCCGTCAGCAGAAAATTAAAACTGTTGACGGTATCCAAGCCAAGCAGGATGTATCTGCAGCTTA
TCTGGAAAAATTCCGTCAAAAAGTCGAATTTTATGGGAATCGTTTTTATCCTGAATCTGCCCGTATACAGCGCTTGGCGG
GTGACGTCCGCTTAATGGTAATTCTGAATCAAAATGGGGGTATTCGAGCGATTCGATTGTTGGAATCTTCTGGTCATACT
GTATTGGATGAAGCTGCTCGAACCTCATTACGTAAGGCTGCGCCGTTTGGTGCTTTTGATGCCAACATGAAAGATATTTC
AGAATTACGAATTATCCGAACCTGGCGTTTTGATCCGGCAGAGGCAGAGTTTGAAGTGCGTTAA

Domains

Predicted by InterproScan.

Gram-negative bacterial TonB protein C-terminal (TonB_C)

(201-277)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tonB2 Acinetobacter baumannii D1279779

71.786

97.561

0.7

Multiple sequence alignment