Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   BSA171_RS13990 Genome accession   NZ_CP015611
Coordinates   2691025..2691222 (-) Length   65 a.a.
NCBI ID   WP_041089812.1    Uniprot ID   -
Organism   Bacillus safensis strain U17-1     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 2686025..2696222
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BSA171_RS13965 (BSA171_13740) - 2686397..2687377 (-) 981 WP_075611238.1 ABC transporter ATP-binding protein -
  BSA171_RS13970 (BSA171_13745) - 2687527..2688330 (-) 804 WP_041089816.1 DUF2268 domain-containing protein -
  BSA171_RS13975 (BSA171_13750) fabF 2688408..2689649 (-) 1242 WP_041089814.1 beta-ketoacyl-ACP synthase II -
  BSA171_RS13980 (BSA171_13755) - 2689671..2690609 (-) 939 WP_024425052.1 beta-ketoacyl-ACP synthase III -
  BSA171_RS13985 (BSA171_13760) - 2690781..2691014 (+) 234 WP_024425053.1 hypothetical protein -
  BSA171_RS13990 (BSA171_13765) comZ 2691025..2691222 (-) 198 WP_041089812.1 ComZ family protein Regulator
  BSA171_RS13995 (BSA171_13770) med 2691236..2692198 (-) 963 WP_041089810.1 BMP family ABC transporter substrate-binding protein Regulator
  BSA171_RS14000 (BSA171_13775) - 2692290..2692865 (-) 576 WP_073979848.1 nad binding enzyme -
  BSA171_RS14005 (BSA171_13780) - 2692939..2693679 (-) 741 WP_073979849.1 hypothetical protein -
  BSA171_RS14010 (BSA171_13785) - 2693892..2694086 (+) 195 WP_003211779.1 YjzD family protein -
  BSA171_RS14015 (BSA171_13790) - 2694212..2695477 (-) 1266 WP_024426491.1 MFS transporter -
  BSA171_RS14020 (BSA171_13795) - 2695638..2695817 (-) 180 WP_008348517.1 YjzC family protein -

Sequence

Protein


Download         Length: 65 a.a.        Molecular weight: 7391.42 Da        Isoelectric Point: 4.1509

>NTDB_id=181465 BSA171_RS13990 WP_041089812.1 2691025..2691222(-) (comZ) [Bacillus safensis strain U17-1]
MQHEKSMEFLQIAMKYFPQAKDELDKAGIQLEPEALQPLLTLFTSVMQEAYELGKADAESEKATE

Nucleotide


Download         Length: 198 bp        

>NTDB_id=181465 BSA171_RS13990 WP_041089812.1 2691025..2691222(-) (comZ) [Bacillus safensis strain U17-1]
ATGCAGCACGAAAAATCGATGGAATTTTTACAAATTGCTATGAAGTATTTTCCGCAGGCAAAGGACGAGTTAGATAAAGC
TGGGATTCAGCTTGAGCCTGAAGCTCTCCAGCCGCTTCTAACATTATTTACATCTGTCATGCAGGAAGCATACGAGCTTG
GAAAAGCAGATGCAGAATCAGAAAAAGCCACAGAATAG

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

70.492

93.846

0.662

Multiple sequence alignment