Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   BSA171_RS12715 Genome accession   NZ_CP015611
Coordinates   2457868..2458440 (-) Length   190 a.a.
NCBI ID   WP_075611339.1    Uniprot ID   -
Organism   Bacillus safensis strain U17-1     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 2452868..2463440
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BSA171_RS12685 (BSA171_12485) - 2452913..2453404 (-) 492 WP_075611343.1 molybdenum cofactor biosynthesis protein MoaE -
  BSA171_RS12690 (BSA171_12490) mobB 2453401..2453925 (-) 525 WP_075612375.1 molybdopterin-guanine dinucleotide biosynthesis protein B -
  BSA171_RS12695 (BSA171_12495) glp 2453907..2455184 (-) 1278 WP_075611342.1 gephyrin-like molybdotransferase Glp -
  BSA171_RS12700 (BSA171_12500) - 2455194..2456210 (-) 1017 WP_075611341.1 thiazole biosynthesis adenylyltransferase ThiF -
  BSA171_RS12705 (BSA171_12505) - 2456241..2456822 (-) 582 WP_041084987.1 molybdenum cofactor guanylyltransferase -
  BSA171_RS12710 (BSA171_12510) - 2456907..2457824 (+) 918 WP_075611340.1 sigmaE regulated sporulation protein -
  BSA171_RS12715 (BSA171_12515) rok 2457868..2458440 (-) 573 WP_075611339.1 transcriptional regulator Rok Regulator
  BSA171_RS12720 (BSA171_12520) - 2458921..2459379 (-) 459 WP_024424727.1 TlpA family protein disulfide reductase -
  BSA171_RS12725 (BSA171_12525) ahpA 2459462..2460004 (-) 543 WP_003211758.1 biofilm-specific peroxidase AhpA -
  BSA171_RS12730 (BSA171_12530) - 2460277..2461086 (+) 810 WP_041084989.1 mechanosensitive ion channel family protein -
  BSA171_RS12735 (BSA171_12535) - 2461107..2461349 (-) 243 WP_024424725.1 YkuS family protein -
  BSA171_RS12740 (BSA171_12540) - 2461400..2462578 (-) 1179 WP_052468207.1 N-acetyldiaminopimelate deacetylase -
  BSA171_RS12745 (BSA171_12545) dapD 2462612..2463322 (-) 711 WP_008347987.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -

Sequence

Protein


Download         Length: 190 a.a.        Molecular weight: 21557.53 Da        Isoelectric Point: 9.7309

>NTDB_id=181457 BSA171_RS12715 WP_075611339.1 2457868..2458440(-) (rok) [Bacillus safensis strain U17-1]
MFNEREALRLRLEQLNEAEVKVIREYQIERDAIYAKLRELDRQGTGLVSDTKKEVRTERKTDSLPVLAELAAQEMRSYQQ
PAQPQSSSLATGQLNGAPVGIPEGSTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTF
MQSLIKMYPEVKKPYRGQYILEGDIQTEDE

Nucleotide


Download         Length: 573 bp        

>NTDB_id=181457 BSA171_RS12715 WP_075611339.1 2457868..2458440(-) (rok) [Bacillus safensis strain U17-1]
TTGTTTAATGAGAGGGAAGCGTTACGTTTACGATTGGAACAATTAAACGAGGCAGAAGTAAAGGTCATCCGTGAATATCA
AATTGAGCGCGATGCGATTTATGCAAAATTAAGAGAATTAGACCGTCAAGGAACAGGCCTAGTGTCAGATACAAAAAAAG
AAGTACGTACAGAAAGAAAGACAGATTCACTGCCTGTATTAGCTGAGCTTGCTGCGCAAGAAATGAGAAGCTATCAGCAG
CCGGCACAACCACAATCATCATCTTTAGCAACAGGACAGCTAAACGGTGCACCTGTAGGTATTCCTGAAGGATCGACAAG
ACGCAGAAGAGGCACAGCTCGTCCTGGCTCAAAGGCAGCGAAGCTACGTGAAGCTGCGATTAAAACGTTAAAACGTCATA
ATGCAGCGATTAAAAGCTCAGAGCTTCAAAAAGAGATCGAAAAAGAGAGCGGTCTTGAAATCCCAAATATGACAACGTTT
ATGCAAAGCTTAATTAAAATGTATCCTGAAGTGAAGAAGCCTTATCGCGGACAGTATATTTTAGAAGGCGACATTCAAAC
AGAAGACGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

81.283

98.421

0.8

Multiple sequence alignment