Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | BSA41_RS17760 | Genome accession | NZ_CP015610 |
| Coordinates | 3404728..3405018 (-) | Length | 96 a.a. |
| NCBI ID | WP_087975202.1 | Uniprot ID | - |
| Organism | Bacillus safensis strain U41 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 3399728..3410018
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BSA41_RS17720 (BSA41_17360) | - | 3399760..3400089 (+) | 330 | WP_024425625.1 | cyclic-di-AMP receptor | - |
| BSA41_RS17725 (BSA41_17365) | - | 3400102..3400542 (+) | 441 | WP_073979327.1 | YaaR family protein | - |
| BSA41_RS17730 (BSA41_17370) | holB | 3400554..3401543 (+) | 990 | WP_041085337.1 | DNA polymerase III subunit delta' | - |
| BSA41_RS17735 (BSA41_17375) | - | 3401546..3402373 (+) | 828 | WP_024425628.1 | stage 0 sporulation family protein | - |
| BSA41_RS17740 (BSA41_17380) | yabA | 3402388..3402741 (+) | 354 | WP_039175883.1 | DNA replication initiation control protein YabA | - |
| BSA41_RS17745 (BSA41_17385) | - | 3402797..3403540 (+) | 744 | WP_075612245.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| BSA41_RS17750 (BSA41_17390) | - | 3403527..3403826 (+) | 300 | WP_039175889.1 | GIY-YIG nuclease family protein | - |
| BSA41_RS17755 (BSA41_17395) | rsmI | 3403801..3404682 (+) | 882 | WP_073979324.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| BSA41_RS17760 (BSA41_17400) | abrB | 3404728..3405018 (-) | 291 | WP_087975202.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Regulator |
| BSA41_RS17770 (BSA41_17405) | metG | 3405533..3407533 (+) | 2001 | WP_075612247.1 | methionine--tRNA ligase | - |
| BSA41_RS17775 (BSA41_17410) | - | 3407615..3408382 (+) | 768 | WP_041085329.1 | TatD family hydrolase | - |
| BSA41_RS17780 (BSA41_17415) | - | 3408627..3409829 (+) | 1203 | WP_075612248.1 | G5 and 3D domain-containing protein | - |
Sequence
Protein
Download Length: 96 a.a. Molecular weight: 10853.65 Da Isoelectric Point: 7.9655
>NTDB_id=181414 BSA41_RS17760 WP_087975202.1 3404728..3405018(-) (abrB) [Bacillus safensis strain U41]
MKMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLANGKLVLSREG
AEQIINEIQNQLQSQK
MKMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLANGKLVLSREG
AEQIINEIQNQLQSQK
Nucleotide
Download Length: 291 bp
>NTDB_id=181414 BSA41_RS17760 WP_087975202.1 3404728..3405018(-) (abrB) [Bacillus safensis strain U41]
ATGAAGATGAAATCTACAGGTATTGTACGTAAAGTTGACGAATTAGGACGCGTGGTGATTCCAATCGAACTTCGCCGTAC
GCTAGGAATCGCTGAAAAAGACGCTTTGGAAATTTATGTTGATGATGAAAAAATTATCCTAAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACAGGTGAAGTATCAGACGATAACCTTAAACTTGCTAATGGTAAATTAGTTCTTAGCCGTGAAGGT
GCAGAGCAAATCATTAACGAAATCCAAAACCAACTTCAATCACAAAAATAA
ATGAAGATGAAATCTACAGGTATTGTACGTAAAGTTGACGAATTAGGACGCGTGGTGATTCCAATCGAACTTCGCCGTAC
GCTAGGAATCGCTGAAAAAGACGCTTTGGAAATTTATGTTGATGATGAAAAAATTATCCTAAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACAGGTGAAGTATCAGACGATAACCTTAAACTTGCTAATGGTAAATTAGTTCTTAGCCGTGAAGGT
GCAGAGCAAATCATTAACGAAATCCAAAACCAACTTCAATCACAAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
93.75 |
100 |
0.938 |