Detailed information NTG0181402

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: BSA41_RS14435
• Genome accession: NZ_CP015610
• Coordinates: 2734684..2735280 (+)
• Length: 198 a.a.
• NCBI ID: WP_024427684.1
• Uniprot ID: -
• Organism: Bacillus safensis strain U41
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
Prophage	2730230..2735280	2734684..2735280	within	0

Gene organization within MGE regions

Location: 2730230..2735280

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BSA41_RS14405 (BSA41_14095)	-	2730230..2730553 (-)	324	WP_186303737.1	DUF771 domain-containing protein	-
BSA41_RS14410 (BSA41_14100)	-	2730589..2730795 (-)	207	WP_075611961.1	helix-turn-helix domain-containing protein	-
BSA41_RS14415 (BSA41_14105)	-	2730960..2731352 (+)	393	WP_075611962.1	helix-turn-helix domain-containing protein	-
BSA41_RS19995	-	2731632..2731760 (-)	129	WP_269199591.1	hypothetical protein	-
BSA41_RS14420 (BSA41_14110)	-	2731776..2732864 (-)	1089	WP_075611963.1	AimR family lysis-lysogeny pheromone receptor	-
BSA41_RS14425 (BSA41_14115)	-	2733087..2734223 (+)	1137	WP_075611964.1	site-specific integrase	-
BSA41_RS14435 (BSA41_14125)	clpP	2734684..2735280 (+)	597	WP_024427684.1	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	Regulator

Sequence

Protein

• Length: 198 a.a.
• Molecular weight: 21832.00 Da
• Isoelectric Point: 4.6835

>NTDB_id=181402 BSA41_RS14435 WP_024427684.1 2734684..2735280(+) (clpP) [Bacillus safensis strain U41]
MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLEAEDPEKDISIYINSPGGSITAGMAIYDT
MQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILSLRDKLNQVLAERTGQ
PIEVIERDTDRDNFKTAEEALQYGLIDKVLTRNTEDQK

Nucleotide

• Length: 597 bp

>NTDB_id=181402 BSA41_RS14435 WP_024427684.1 2734684..2735280(+) (clpP) [Bacillus safensis strain U41]
ATGAATTTAATACCTACAGTCATTGAGCAAACAAATCGTGGGGAAAGAGCTTACGACATTTATTCTCGTCTTTTAAAAGA
CCGTATTATCATGCTTGGTTCTGCGATCGATGACAATGTTGCCAACTCCATCGTGTCACAGCTGCTTTTCTTAGAAGCTG
AAGATCCAGAAAAAGATATTTCTATCTACATTAACAGCCCTGGCGGTTCAATCACAGCTGGTATGGCCATTTACGATACG
ATGCAATTTATTAAACCAAAGGTATCAACTATTTGTATTGGTATGGCTGCATCTATGGGTGCGTTCCTGCTTGCTGCTGG
TGAAAAAGGTAAGCGTTATGCTCTTCCAAACAGTGAAGTCATGATTCACCAACCACTAGGCGGAGCCCAAGGTCAAGCAA
CAGAAATTGAAATTGCGGCAAAACGAATCCTTTCTTTACGCGATAAACTGAACCAAGTACTTGCTGAACGTACTGGTCAG
CCAATTGAAGTCATTGAGCGCGATACAGATCGTGACAACTTCAAAACAGCGGAAGAAGCACTTCAATACGGACTCATTGA
CAAAGTCTTGACCCGTAATACAGAAGACCAAAAATAA

Domains

Predicted by InterproScan.

• Clp protease (CLP_protease) (13-192)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Bacillus subtilis subsp. subtilis str. 168	93.939	100	0.939
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	67.539	96.465	0.652
clpP	Streptococcus thermophilus LMG 18311	58.549	97.475	0.571
clpP	Streptococcus thermophilus LMD-9	58.549	97.475	0.571
clpP	Lactococcus lactis subsp. cremoris KW2	56.186	97.98	0.551
clpP	Streptococcus pneumoniae Rx1	55.67	97.98	0.545
clpP	Streptococcus pneumoniae D39	55.67	97.98	0.545
clpP	Streptococcus pneumoniae R6	55.67	97.98	0.545
clpP	Streptococcus pneumoniae TIGR4	55.67	97.98	0.545
clpP	Streptococcus pyogenes JRS4	55.44	97.475	0.54
clpP	Streptococcus pyogenes MGAS315	55.44	97.475	0.54
clpP	Streptococcus mutans UA159	54.639	97.98	0.535
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	54.124	97.98	0.53