Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   BSA41_RS05350 Genome accession   NZ_CP015610
Coordinates   999200..999772 (+) Length   190 a.a.
NCBI ID   WP_075611339.1    Uniprot ID   -
Organism   Bacillus safensis strain U41     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 994200..1004772
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BSA41_RS05320 (BSA41_05170) dapD 994318..995028 (+) 711 WP_008347987.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  BSA41_RS05325 (BSA41_05175) - 995062..996240 (+) 1179 WP_052468207.1 N-acetyldiaminopimelate deacetylase -
  BSA41_RS05330 (BSA41_05180) - 996291..996533 (+) 243 WP_024424725.1 YkuS family protein -
  BSA41_RS05335 (BSA41_05185) - 996554..997363 (-) 810 WP_041084989.1 mechanosensitive ion channel family protein -
  BSA41_RS05340 (BSA41_05190) ahpA 997636..998178 (+) 543 WP_003211758.1 biofilm-specific peroxidase AhpA -
  BSA41_RS05345 (BSA41_05195) - 998261..998719 (+) 459 WP_024424727.1 TlpA family protein disulfide reductase -
  BSA41_RS05350 (BSA41_05200) rok 999200..999772 (+) 573 WP_075611339.1 transcriptional regulator Rok Regulator
  BSA41_RS05355 (BSA41_05205) - 999816..1000733 (-) 918 WP_075611340.1 sigmaE regulated sporulation protein -
  BSA41_RS05360 (BSA41_05210) - 1000818..1001399 (+) 582 WP_041084987.1 molybdenum cofactor guanylyltransferase -
  BSA41_RS05365 (BSA41_05215) - 1001430..1002446 (+) 1017 WP_075611341.1 thiazole biosynthesis adenylyltransferase ThiF -
  BSA41_RS05370 (BSA41_05220) glp 1002456..1003733 (+) 1278 WP_075611342.1 gephyrin-like molybdotransferase Glp -
  BSA41_RS05375 (BSA41_05225) mobB 1003715..1004239 (+) 525 WP_075612375.1 molybdopterin-guanine dinucleotide biosynthesis protein B -
  BSA41_RS05380 (BSA41_05230) - 1004236..1004727 (+) 492 WP_075611343.1 molybdenum cofactor biosynthesis protein MoaE -

Sequence

Protein


Download         Length: 190 a.a.        Molecular weight: 21557.53 Da        Isoelectric Point: 9.7309

>NTDB_id=181376 BSA41_RS05350 WP_075611339.1 999200..999772(+) (rok) [Bacillus safensis strain U41]
MFNEREALRLRLEQLNEAEVKVIREYQIERDAIYAKLRELDRQGTGLVSDTKKEVRTERKTDSLPVLAELAAQEMRSYQQ
PAQPQSSSLATGQLNGAPVGIPEGSTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTF
MQSLIKMYPEVKKPYRGQYILEGDIQTEDE

Nucleotide


Download         Length: 573 bp        

>NTDB_id=181376 BSA41_RS05350 WP_075611339.1 999200..999772(+) (rok) [Bacillus safensis strain U41]
TTGTTTAATGAGAGGGAAGCGTTACGTTTACGATTGGAACAATTAAACGAGGCAGAAGTAAAGGTCATCCGTGAATATCA
AATTGAGCGCGATGCGATTTATGCAAAATTAAGAGAATTAGACCGTCAAGGAACAGGCCTAGTGTCAGATACAAAAAAAG
AAGTACGTACAGAAAGAAAGACAGATTCACTGCCTGTATTAGCTGAGCTTGCTGCGCAAGAAATGAGAAGCTATCAGCAG
CCGGCACAACCACAATCATCATCTTTAGCAACAGGACAGCTAAACGGTGCACCTGTAGGTATTCCTGAAGGATCGACAAG
ACGCAGAAGAGGCACAGCTCGTCCTGGCTCAAAGGCAGCGAAGCTACGTGAAGCTGCGATTAAAACGTTAAAACGTCATA
ATGCAGCGATTAAAAGCTCAGAGCTTCAAAAAGAGATCGAAAAAGAGAGCGGTCTTGAAATCCCAAATATGACAACGTTT
ATGCAAAGCTTAATTAAAATGTATCCTGAAGTGAAGAAGCCTTATCGCGGACAGTATATTTTAGAAGGCGACATTCAAAC
AGAAGACGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

81.283

98.421

0.8

Multiple sequence alignment